RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 GALNT12Q8IXK2 581 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 C9orf40Q8IXQ3 194 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 KLHL29Q96CT2 875 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 CNRIP1Q96F85 164 aaPredicted RBP17.45■□□□□ 0.38
NME3-207ENST00000564628 CNPPD1Q9BV87 410 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 TP63Q9H3D4 680 aaPredicted RBP17.45■□□□□ 0.38
NME3-207ENST00000564628 CCDC134Q9H6E4 229 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.45■□□□□ 0.382e-11■■■■■ 42.6
NME3-207ENST00000564628 TNFRSF10DQ9UBN6 386 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 HAO1Q9UJM8 370 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 PSME2Q9UL46 239 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 ERVK-19Q9WJR5 959 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 YARS2Q9Y2Z4 477 aaKnown RBP17.45■□□□□ 0.38
NME3-207ENST00000564628 POLR3HQ9Y535 204 aaPredicted RBP17.45■□□□□ 0.38
NME3-207ENST00000564628 EXPH5Q8NEV8 1989 aa17.45■□□□□ 0.38
NME3-207ENST00000564628 PEX1O43933 1283 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 SNUPNO95149 360 aaKnown RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 CT62P0C5K7 136 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 LINC00032P0C843 101 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 DDCP20711 480 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 BGNP21810 368 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 SOX18P35713 384 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 ALDH9A1P49189 494 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 SLC37A1P57057 533 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 ABCE1P61221 599 aaKnown RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 TFF3Q07654 80 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 ZNF267Q14586 743 aaPredicted RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 CEBPEQ15744 281 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 ARHGAP11AQ6P4F7 1023 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 C16orf47Q6ZP98 133 aaPredicted RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 IKBIPQ70UQ0 350 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 OR5L2Q8NGL0 311 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 PPP1R14CQ8TAE6 165 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 RAB3IL1Q8TBN0 382 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 AGR3Q8TD06 166 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 LRRC8CQ8TDW0 803 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 DOK4Q8TEW6 326 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 SORT1Q99523 831 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 C20orf27Q9GZN8 174 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 ZNF395Q9H8N7 513 aaPredicted RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 NPDC1Q9NQX5 325 aaPredicted RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 TAS2R7Q9NYW3 318 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 UTS2RQ9UKP6 389 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 EXO1Q9UQ84 846 aaKnown RBP17.44■□□□□ 0.38
NME3-207ENST00000564628 HRH3Q9Y5N1 445 aa17.44■□□□□ 0.38
NME3-207ENST00000564628 EML6Q6ZMW3 1958 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 HS6ST1O60243 411 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 SEC22BO75396 215 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 ERAL1O75616 437 aaKnown RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 OR2J2O76002 312 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 HSPA4LO95757 839 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 S1PR1P21453 382 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 TACR1P25103 407 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 FEN1P39748 380 aaKnown RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 SSR4P51571 173 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 MPEG1Q2M385 716 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 PRICKLE4Q2TBC4 344 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 RFTN2Q52LD8 501 aaPredicted RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 ATG16L1Q676U5 607 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 DDIASQ8IXT1 998 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 DMRTC2Q8IXT2 367 aaPredicted RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 CYP4Z2PQ8N1L4 340 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 TMEM156Q8N614 296 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 RND1Q92730 232 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 CTHRC1Q96CG8 243 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 RASL10BQ96S79 203 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 CCT7Q99832 543 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 MANSC1Q9H8J5 431 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 LIN28AQ9H9Z2 209 aaKnown RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 MAT2BQ9NZL9 334 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 ZNF639Q9UID6 485 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.43■□□□□ 0.38
NME3-207ENST00000564628 TMED5Q9Y3A6 229 aa17.43■□□□□ 0.38
NME3-207ENST00000564628 OR6C76A6NM76 312 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 WWP2O00308 870 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 CDC40O60508 579 aaKnown RBP eCLIP17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF354AO60765 605 aaPredicted RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 TOXO94900 526 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 SDC1P18827 310 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 MSX1P28360 303 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 SSTR4P31391 388 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 LSP1P33241 339 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 RFC3P40938 356 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 RPL38P63173 70 aaKnown RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 C2orf80Q0P641 193 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 MAP4K2Q12851 820 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 EBPQ15125 230 aaKnown RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 RGS9BPQ6ZS82 235 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 GPALPP1Q8IXQ4 340 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 SAMD14Q8IZD0 417 aaPredicted RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 LRRC25Q8N386 305 aaPredicted RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF781Q8N8C0 355 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF615Q8N8J6 731 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF441Q8N8Z8 693 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 OR7G1Q8NGA0 311 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF675Q8TD23 568 aa17.42■□□□□ 0.38
NME3-207ENST00000564628 ZNF764Q96H86 408 aaPredicted RBP17.42■□□□□ 0.38
NME3-207ENST00000564628 C3orf30Q96M34 536 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms