RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 POLDIP3Q9BY77 421 aaKnown RBP21.8■■□□□ 1.08
NME3-206ENST00000564252 METTL7AQ9H8H3 244 aa21.8■■□□□ 1.08
NME3-206ENST00000564252 TRPS1Q9UHF7 1281 aa21.8■■□□□ 1.08
NME3-206ENST00000564252 BCAP29Q9UHQ4 241 aa21.8■■□□□ 1.08
NME3-206ENST00000564252 SNX6Q9UNH7 406 aa21.8■■□□□ 1.08
NME3-206ENST00000564252 VPS13CQ709C8 3753 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 CDH16O75309 829 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 IL2RAP01589 272 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 CSNK2A2P19784 350 aaPredicted RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 PTGDSP41222 190 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 TOMM20Q15388 145 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 WHAMMP3Q1A5X7 153 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 WIPI1Q5MNZ9 446 aaPredicted RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 NUP54Q7Z3B4 507 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 C1orf52Q8N6N3 182 aaKnown RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 NOA1Q8NC60 698 aaKnown RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 FAM83FQ8NEG4 500 aaPredicted RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 ADCY4Q8NFM4 1077 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 OR1J4Q8NGS1 313 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 NINJ1Q92982 152 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 KLHL29Q96CT2 875 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 OMA1Q96E52 524 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 HSPBAP1Q96EW2 488 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 LCORQ96JN0 433 aaPredicted RBP21.79■■□□□ 1.08
NME3-206ENST00000564252 ZNF681Q96N22 645 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 NODALQ96S42 347 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 HBEGFQ99075 208 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 RASSF1Q9NS23 344 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 PLLPQ9Y342 182 aa21.79■■□□□ 1.08
NME3-206ENST00000564252 CD8B2A6NJW9 211 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 ACOX3O15254 700 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 URI1O94763 535 aaPredicted RBP21.78■■□□□ 1.08
NME3-206ENST00000564252 OR4F21O95013 312 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 HSD17B3P37058 310 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 NAGLUP54802 743 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 SF3B4Q15427 424 aaKnown RBP eCLIP21.78■■□□□ 1.082e-10■■■■■ 29.7
NME3-206ENST00000564252 LTB4RQ15722 352 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 FLYWCH1Q4VC44 716 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 SLC30A6Q6NXT4 461 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 FAM180BQ6P0A1 224 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 ANGPTL8Q6UXH0 198 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 UHMK1Q8TAS1 419 aaKnown RBP21.78■■□□□ 1.08
NME3-206ENST00000564252 IFT81Q8WYA0 676 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 ABTB1Q969K4 478 aaPredicted RBP21.78■■□□□ 1.08
NME3-206ENST00000564252 CNRIP1Q96F85 164 aaPredicted RBP21.78■■□□□ 1.08
NME3-206ENST00000564252 CXXC4Q9H2H0 198 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 LIME1Q9H400 295 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 FETUBQ9UGM5 382 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 PSME2Q9UL46 239 aa21.78■■□□□ 1.08
NME3-206ENST00000564252 MED12Q93074 2177 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 MBD3L4A6NDZ8 208 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 MBD3L3A6NE82 208 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 MBD3L5A6NJ08 208 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 SNPHO15079 494 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 ICOSLGO75144 302 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 TRA2BP62995 288 aaKnown RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 PLCXD2Q0VAA5 305 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 TRMT12Q53H54 448 aaKnown RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 TCHHL1Q5QJ38 904 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 YRDCQ86U90 279 aaKnown RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 OR52R1Q8NGF1 315 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 MBD3L2Q8NHZ7 208 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 LRRC46Q96FV0 321 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 C16orf45Q96MC5 204 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 TRIB1Q96RU8 372 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 FAIM2Q9BWQ8 316 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 OSBPL11Q9BXB4 747 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 CLEC4MQ9H2X3 399 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 GALNT9Q9HCQ5 603 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 CCM2LQ9NUG4 571 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 NMRK1Q9NWW6 199 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 EHD3Q9NZN3 535 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 VPS29Q9UBQ0 182 aa21.77■■□□□ 1.08
NME3-206ENST00000564252 FOXD3Q9UJU5 478 aaPredicted RBP21.77■■□□□ 1.08
NME3-206ENST00000564252 DOCK7Q96N67 2140 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 A6NNC1 897 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 UGT2B11O75310 529 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 SNRPAP09012 282 aaKnown RBP21.76■■□□□ 1.07
NME3-206ENST00000564252 RHOXF2BP0C7M4 288 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 PCSK2P16519 638 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 PPICP45877 212 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 ALDH9A1P49189 494 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 EMDP50402 254 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 MRPS35P82673 323 aaKnown RBP21.76■■□□□ 1.07
NME3-206ENST00000564252 CLCQ05315 142 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 SNTA1Q13424 505 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 FAM222BQ8WU58 562 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 FOXC2Q99958 501 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 EPB41L4BQ9H329 900 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 CALHM2Q9HA72 323 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 HEY2Q9UBP5 337 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 ST6GALNAC2Q9UJ37 374 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 CBLCQ9ULV8 474 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 ZNF780BQ9Y6R6 833 aa21.76■■□□□ 1.07
NME3-206ENST00000564252 PRRC2AP48634 2157 aaKnown RBP21.75■■□□□ 1.07
NME3-206ENST00000564252 A0A087WUV0 522 aaPredicted RBP21.75■■□□□ 1.07
NME3-206ENST00000564252 C2orf72A6NCS6 295 aa21.75■■□□□ 1.07
NME3-206ENST00000564252 MANBAO00462 879 aa21.75■■□□□ 1.07
NME3-206ENST00000564252 TO15178 435 aa21.75■■□□□ 1.07
NME3-206ENST00000564252 ACTL6AO96019 429 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms