RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 OR5F1O95221 314 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 OR4D2P58180 307 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 VSX2P58304 361 aaPredicted RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 RABEPKQ7Z6M1 372 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZNF655Q8N720 491 aaPredicted RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 GOT1L1Q8NHS2 421 aaPredicted RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZDHHC12Q96GR4 267 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 TCTN2Q96GX1 697 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZNF764Q96H86 408 aaPredicted RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 AHCYL2Q96HN2 611 aaKnown RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 CSF3RQ99062 836 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ACOXLQ9NUZ1 547 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 MRPL39Q9NYK5 338 aaKnown RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 FBXW2Q9UKT8 454 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 A0A1W2PR48 441 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 A0A1W2PRB8 838 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 TLCD2A6NGC4 264 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 CLIC1O00299 241 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 UGT2B11O75310 529 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 C6orf47O95873 294 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 C1QCP02747 245 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 HMGN1P05114 100 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ATF4P18848 351 aaPredicted RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 SOX11P35716 441 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 SERPINB10P48595 397 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 LPAL2Q16609 132 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 DEFB110Q30KQ9 67 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 DEFB134Q4QY38 66 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZC3H12BQ5HYM0 836 aaKnown RBP16.66■□□□□ 0.26
GDE1-203ENST00000564172 CORO6Q6QEF8 472 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ABHD13Q7L211 337 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZBTB46Q86UZ6 589 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 C10orf111Q8N326 155 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 DNAJC22Q8N4W6 341 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 CSNK1A1LQ8N752 337 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 OR4A15Q8NGL6 344 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 OR4C6Q8NH72 309 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ZFP90Q8TF47 636 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 CCDC3Q9BQI4 270 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 FAIM2Q9BWQ8 316 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 ROGDIQ9GZN7 287 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 VPS13AQ96RL7 3174 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 IGHV5-51A0A0C4DH38 117 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 C1orf226A1L170 272 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ALOX12P18054 663 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 SLC14A1Q13336 389 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 TRIM61Q5EBN2 209 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ZNF773Q6PK81 442 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ZBTB49Q6ZSB9 765 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 MCATQ8IVS2 390 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 MUC13Q9H3R2 512 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 EHD3Q9NZN3 535 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 MRPS2Q9Y399 296 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 PCDHB3Q9Y5E6 796 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 SNX13Q9Y5W8 968 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ASXL3Q9C0F0 2248 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 A0A0G2JMP0 313 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 WASHC1A8K0Z3 465 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ARPC2O15144 300 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 UPK1BO75841 260 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 C9P02748 559 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ALPPL2P10696 532 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ENGP17813 658 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ATP6V1B2P21281 511 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 HTR2BP41595 481 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 AMZ1Q400G9 498 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 SLC36A3Q495N2 470 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 INTS11Q5TA45 600 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 LCN8Q6JVE9 175 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 SLC23A3Q6PIS1 610 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 OR2T12Q8NG77 320 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 OR6Q1Q8NGQ2 317 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 EXOSC8Q96B26 276 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 INTS12Q96CB8 462 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 SERINC2Q96SA4 455 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 CD180Q99467 661 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 MAPKAP1Q9BPZ7 522 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 TPT1P8Q9HAU6 139 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ANKHQ9HCJ1 492 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 SLAMF7Q9NQ25 335 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 STARD5Q9NSY2 213 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 DDX28Q9NUL7 540 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 ADPRHL2Q9NX46 363 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 TAS2R9Q9NYW1 312 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 ZNF282Q9UDV7 671 aaPredicted RBP16.65■□□□□ 0.26
GDE1-203ENST00000564172 DMDP11532 3685 aa16.65■□□□□ 0.26
GDE1-203ENST00000564172 PCDH15Q96QU1 1955 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 PCP4L1A6NKN8 68 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 TOR1AO14656 332 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 PROM1O43490 865 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 SRPX2O60687 465 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 PRKRAO75569 313 aaKnown RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 CTSBP07858 339 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 BMP2P12643 396 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 BMP4P12644 408 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 GZMMP51124 257 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 PCBP4P57723 403 aaKnown RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 RHDQ02161 417 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms