RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 OPN5Q6U736 354 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 TMIGD1Q6UXZ0 262 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 PLEKHM3Q6ZWE6 761 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 MILR1Q7Z6M3 343 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 C10orf107Q8IVU9 208 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 PM20D2Q8IYS1 436 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 LRRC25Q8N386 305 aaPredicted RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 CCNYL1Q8N7R7 359 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 TRPV3Q8NET8 790 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 NSUN5Q96P11 429 aaKnown RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 SPNS1Q9H2V7 528 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 ZBTB26Q9HCK0 441 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 ZNF446Q9NWS9 450 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CAMK2AQ9UQM7 478 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 MMACHCQ9Y4U1 282 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 MBD3L3A6NE82 208 aaPredicted RBP14.53□□□□□ -0.08
RNF40-205ENST00000563909 OR7A17O14581 309 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 BPGMP07738 259 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 TMIGD3P0DMS9 266 aaPredicted RBP14.53□□□□□ -0.08
RNF40-205ENST00000563909 PAX1P15863 534 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 ATP5J2P56134 94 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 SLC22A10Q63ZE4 541 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 MED27Q6P2C8 311 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 MYLK4Q86YV6 388 aaPredicted RBP14.53□□□□□ -0.08
RNF40-205ENST00000563909 CA13Q8N1Q1 262 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 L3MBTL4Q8NA19 623 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 MBD3L2Q8NHZ7 208 aaPredicted RBP14.53□□□□□ -0.08
RNF40-205ENST00000563909 TRPC4APQ8TEL6 797 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 REPS1Q96D71 796 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 JSRP1Q96MG2 331 aaPredicted RBP14.53□□□□□ -0.08
RNF40-205ENST00000563909 AMBRA1Q9C0C7 1298 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 QPCTLQ9NXS2 382 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 NKIRAS1Q9NYS0 192 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 PCDHGA11Q9Y5H2 935 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 NCKAP5O14513 1909 aa14.53□□□□□ -0.08
RNF40-205ENST00000563909 TGP01266 2768 aa14.52□□□□□ -0.08
RNF40-205ENST00000563909 TMEM120BA0PK00 339 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ANKDD1BA6NHY2 528 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 LRRC3CA6NJW4 275 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 H3BQF6 201 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 TGFBR3LH3BV60 316 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 BIRC5O15392 142 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 SMIM10L1P0DMW3 83 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 CD22P20273 847 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 SERPINB1P30740 379 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 SERPINB4P48594 390 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 PKNOX1P55347 436 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 LCP2Q13094 533 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 VEZF1Q14119 521 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 MPP2Q14168 576 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 TTMPQ5BVD1 217 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 PRAMEF20Q5VT98 475 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 HHATQ5VTY9 493 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 RPS27LQ71UM5 84 aaKnown RBP14.52□□□□□ -0.09
RNF40-205ENST00000563909 NUDCD3Q8IVD9 361 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 LAS2Q8IYD9 372 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ZNF441Q8N8Z8 693 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ANKRD42Q8N9B4 389 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ANKRD53Q8N9V6 530 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 C9orf106Q8NAJ2 232 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 OR4F6Q8NGB9 312 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 OR52B6Q8NGF0 335 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 SMIM10Q96HG1 83 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 WFIKKN1Q96NZ8 548 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 PIGQQ9BRB3 760 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 MECRQ9BV79 373 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 GATA5Q9BWX5 397 aaPredicted RBP14.52□□□□□ -0.09
RNF40-205ENST00000563909 REG4Q9BYZ8 158 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 PRDM14Q9GZV8 571 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 GSTO2Q9H4Y5 243 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 KLHL31Q9H511 634 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ADAP2Q9NPF8 381 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ZNF701Q9NV72 531 aaPredicted RBP14.52□□□□□ -0.09
RNF40-205ENST00000563909 KLHL28Q9NXS3 571 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ZNF226Q9NYT6 803 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 ZNF490Q9ULM2 529 aaPredicted RBP14.52□□□□□ -0.09
RNF40-205ENST00000563909 RNF11Q9Y3C5 154 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 CLCA3PQ9Y6N3 262 aa14.52□□□□□ -0.09
RNF40-205ENST00000563909 A8MV72 311 aaPredicted RBP14.51□□□□□ -0.09
RNF40-205ENST00000563909 H0YIV9 168 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 DHRS4L1P0CG22 281 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 TSPAN8P19075 237 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 HPDP32754 393 aaPredicted RBP14.51□□□□□ -0.09
RNF40-205ENST00000563909 MC3RP41968 323 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 RNF4P78317 190 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 TRAF3Q13114 568 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 SLC13A2Q13183 592 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 CLEC12BQ2HXU8 276 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 GGTA1PQ4G0N0 100 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 FRMD7Q6ZUT3 714 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 SCUBE1Q8IWY4 988 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 TMEM132CQ8N3T6 1108 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 TMEM171Q8WVE6 324 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 NTNG2Q96CW9 530 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 CDK15Q96Q40 435 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 HS3ST6Q96QI5 342 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 ZNF382Q96SR6 550 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 PAIP2Q9BPZ3 127 aaKnown RBP14.51□□□□□ -0.09
RNF40-205ENST00000563909 TRMOQ9BU70 441 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms