RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CCBE1Q6UXH8 406 aaPredicted RBP4.33□□□□□ -1.72
LINC00557-201ENST00000563184 PRSS48Q7RTY5 328 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 CEACAM19Q7Z692 300 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 CDC20BQ86Y33 519 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 HIPK1Q86Z02 1210 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 RNF148Q8N7C7 305 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 MINDY2Q8NBR6 621 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 OR4F17Q8NGA8 305 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 OR4F4Q96R69 305 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ZBP1Q9H171 429 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 RNF41Q9H4P4 317 aaPredicted RBP4.33□□□□□ -1.72
LINC00557-201ENST00000563184 RPS10P5Q9NQ39 176 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ABCC13Q9NSE7 274 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 SOHLH2Q9NX45 425 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 CLEC5AQ9NY25 188 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ARMCX1Q9P291 453 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 CIDEBQ9UHD4 219 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 PURGQ9UJV8 347 aaKnown RBP4.33□□□□□ -1.72
LINC00557-201ENST00000563184 PLA2G4CQ9UP65 541 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 RNF24Q9Y225 148 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 A0A087WWV3 80 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF487B1APH4 448 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 BCL2L11O43521 198 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 PDE5AO76074 875 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 ECDO95905 644 aaPredicted RBP4.32□□□□□ -1.72
LINC00557-201ENST00000563184 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 HSD17B1P14061 328 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 GP9P14770 177 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 PRDX2P32119 198 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 NUMBP49757 651 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 RAG2P55895 527 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 PDIA5Q14554 519 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 SLC1A5Q15758 541 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 APOOLQ6UXV4 268 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 RANBP3LQ86VV4 465 aaPredicted RBP4.32□□□□□ -1.72
LINC00557-201ENST00000563184 OR56B1Q8NGI3 324 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 U2AF1L4Q8WU68 220 aaKnown RBP4.32□□□□□ -1.72
LINC00557-201ENST00000563184 LHX4Q969G2 390 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 FAM111AQ96PZ2 611 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 FAM173AQ9BQD7 235 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 APOOQ9BUR5 198 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 ATG10Q9H0Y0 220 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 ODF2LQ9ULJ1 636 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 SLC9A8Q9Y2E8 581 aa4.32□□□□□ -1.72
LINC00557-201ENST00000563184 IGHV3OR16-12A0A075B7B8 117 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 NPIPA5A0A0B4J1W7 369 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 NPIPA5E9PKD4 350 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.31□□□□□ -1.72
LINC00557-201ENST00000563184 PDLIM1O00151 329 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 EI24O14681 340 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 LRRTM2O43300 516 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 PRPSAP2O60256 369 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 KBTBD11O94819 623 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 TOXO94900 526 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 GOT2P00505 430 aaKnown RBP4.31□□□□□ -1.72
LINC00557-201ENST00000563184 CCNA2P20248 432 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 HMGCLP35914 325 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 PTGER3P43115 390 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 SLC7A2P52569 658 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 SNX1Q13596 522 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 STOX1Q6ZVD7 989 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 GPBP1Q86WP2 473 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 ERC1Q8IUD2 1116 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 CRYGNQ8WXF5 182 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 DLX4Q92988 240 aaPredicted RBP4.31□□□□□ -1.72
LINC00557-201ENST00000563184 RANBP9Q96S59 729 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 TMEM231Q9H6L2 316 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 CENPMQ9NSP4 180 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
LINC00557-201ENST00000563184 NOTCH3Q9UM47 2321 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 TRAV9-2A0A087WT02 112 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 E9PAM4 449 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 H3BMH7 237 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 CFLARO15519 480 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 GPRIN2O60269 458 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 PTBP3O95758 552 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 WNT2P09544 360 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 HOXB7P09629 217 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 FUT1P19526 365 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 RFC2P35250 354 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 SLC26A5P58743 744 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 TRA2BP62995 288 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 GABPB1Q06547 395 aaPredicted RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 KARSQ15046 597 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 C15orf32Q32M92 178 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 SEL1L3Q68CR1 1132 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF774Q6NX45 483 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 ISLR2Q6UXK2 745 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 GOLGA7Q7Z5G4 137 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 SLC22A18ASQ8N1D0 253 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 ARL14Q8N4G2 192 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 ARFGAP2Q8N6H7 521 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 GPATCH11Q8N954 259 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 CNNM3Q8NE01 707 aa4.3□□□□□ -1.72
LINC00557-201ENST00000563184 WDR36Q8NI36 951 aaKnown RBP4.3□□□□□ -1.72
LINC00557-201ENST00000563184 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms