RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 BBS4Q96RK4 519 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 HDAC8Q9BY41 377 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SAP130Q9H0E3 1048 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ANKRA2Q9H9E1 313 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TIGARQ9NQ88 270 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 CALML5Q9NZT1 146 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SLC23A2Q9UGH3 650 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 C1QTNF3-AMACRE9PGA6 284 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 MAN2B1O00754 1011 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 POLR1CO15160 346 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 HCN1O60741 890 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TMCC2O75069 709 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TIMP1P01033 207 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 CSF3P09919 207 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 CCL5P13501 91 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SDC2P34741 201 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 MTNR1AP48039 350 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 MAN2A2P49641 1150 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 NCBP2P52298 156 aaKnown RBP eCLIP12.33□□□□□ -0.44
USB1-207ENST00000563149 MXD1Q05195 221 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PRDX1Q06830 199 aaKnown RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 ACSM1Q08AH1 577 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TRAM2Q15035 370 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ZIC1Q15915 447 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ZNF730Q6ZMV8 503 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SIMC1Q8NDZ2 872 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 OR5D16Q8NGK9 328 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 RFKQ969G6 155 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 C1GALT1C1Q96EU7 318 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ARHGAP9Q9BRR9 750 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TEX12Q9BXU0 123 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TPK1Q9H3S4 243 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PRKAG2Q9UGJ0 569 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 A0A087WUU8 490 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 LRIT2A6NDA9 550 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 LCMT2O60294 686 aaKnown RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 UBXN7O94888 489 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 HLA-DQB1P01920 261 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 ALPPP05187 535 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 CHRM4P08173 479 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 SLC35G4P0C7Q5 338 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 CSF2RAP15509 400 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 TCEA1P23193 301 aaKnown RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 NTHL1P78549 312 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 FLYWCH1Q4VC44 716 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 CRTC2Q53ET0 693 aaPredicted RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 ZNF628Q5EBL2 1059 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 SZRD1Q7Z422 152 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 COMTD1Q86VU5 262 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 KIF18BQ86Y91 864 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 Q8N9G6 341 aaPredicted RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 TP53I13Q8NBR0 393 aaPredicted RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 CHFRQ96EP1 664 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 GPA33Q99795 319 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 ARHGDIGQ99819 225 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 KATNB1Q9BVA0 655 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 RAB11FIP5Q9BXF6 653 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 KCNK12Q9HB15 430 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 MED17Q9NVC6 651 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 ZNF232Q9UNY5 417 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 PRKAB1Q9Y478 270 aa12.32□□□□□ -0.44
USB1-207ENST00000563149 MUC22E2RYF6 1773 aaPredicted RBP12.32□□□□□ -0.44
USB1-207ENST00000563149 COL4A3Q01955 1670 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 CHST10O43529 356 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 TRIM3O75382 744 aaPredicted RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 FHP07954 510 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 POU2F2P09086 479 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 CLEC2LP0C7M8 214 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 CEBPBP17676 345 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 AZGP1P25311 298 aaKnown RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 HLA-DMAP28067 261 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 PSMB5P28074 263 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 BUD31P41223 144 aaPredicted RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 STAT5AP42229 794 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 CDK3Q00526 305 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 DMPKQ09013 629 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 FUT5Q11128 374 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 ST3GAL3Q11203 375 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 CDK10Q15131 360 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 TBRG1Q3YBR2 411 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 TCEAL5Q5H9L2 206 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 LCN1P1Q5VSP4 162 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 MRM1Q6IN84 353 aaKnown RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 GRASPQ7Z6J2 395 aaPredicted RBP12.31□□□□□ -0.44
USB1-207ENST00000563149 CACTIN-AS1Q8N1I8 211 aa12.31□□□□□ -0.44
USB1-207ENST00000563149 AMER3Q8N944 861 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms