RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 MRPS35P82673 323 aaKnown RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 BST1Q10588 318 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 ART3Q13508 389 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 ZNF791Q3KP31 576 aaPredicted RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 TRMT12Q53H54 448 aaKnown RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 C6orf136Q5SQH8 315 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 SULF2Q8IWU5 870 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 TRIM42Q8IWZ5 723 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 OR52R1Q8NGF1 315 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 MGARPQ8TDB4 240 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 ARL8AQ96BM9 186 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 SPACA9Q96E40 222 aaPredicted RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 TSSK3Q96PN8 268 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 REEP4Q9H6H4 257 aa15.27■□□□□ 0.04
CDT1-202ENST00000562747 KLF2Q9Y5W3 355 aaPredicted RBP15.27■□□□□ 0.04
CDT1-202ENST00000562747 DCHS2Q6V1P9 2916 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 ATP6AP2A0A1C7CYW4 349 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 CAPN14A8MX76 684 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 PLOD3O60568 738 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 ATP6AP2O75787 350 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 UNC5CO95185 931 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 SNRPB2P08579 225 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 DDX5P17844 614 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 MEOX1P50221 254 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 NCBP2P52298 156 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDT1-202ENST00000562747 NRG3P56975 720 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 DCAF7P61962 342 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 ALDH6A1Q02252 535 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 DUSP8Q13202 625 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 MAD2L1Q13257 205 aaPredicted RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 PDE7AQ13946 482 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 EXOSC7Q15024 291 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 PDCD2Q16342 344 aaPredicted RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 PRSS53Q2L4Q9 553 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 SMU1Q2TAY7 513 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 ATG16L1Q676U5 607 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 R3HCC1LQ7Z5L2 792 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 CPSF7Q8N684 471 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 FNDC5Q8NAU1 212 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 GFM2Q969S9 779 aaKnown RBP15.26■□□□□ 0.03
CDT1-202ENST00000562747 TUBGCP3Q96CW5 907 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 MTERF3Q96E29 417 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 SH3GL2Q99962 352 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 SACM1LQ9NTJ5 587 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 THAP1Q9NVV9 213 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 GIMAP2Q9UG22 337 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 BAIAP2L1Q9UHR4 511 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 SH3BGRL2Q9UJC5 107 aa15.26■□□□□ 0.03
CDT1-202ENST00000562747 C2CD3Q4AC94 2353 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 POLQO75417 2590 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 A0A087WV62 115 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 TRGV8A0A0C4DH27 118 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 PLOD2O00469 737 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 SNNO75324 88 aaPredicted RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 P04436 131 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 JUNP05412 331 aaKnown RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 IFI6P09912 130 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 PRPS2P11908 318 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 ZNF24P17028 368 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 CNR1P21554 472 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 RPL3P39023 403 aaKnown RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 EMDP50402 254 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 NTRK2Q16620 822 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 KRTCAP3Q53RY4 240 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 SLC22A10Q63ZE4 541 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 BNC2Q6ZN30 1099 aaPredicted RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 MRGPRGQ86SM5 289 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 LIX1Q8N485 282 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 ZFP62Q8NB50 900 aaPredicted RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 SIMC1Q8NDZ2 872 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 PAQR8Q8TEZ7 354 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 KAT2AQ92830 837 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 PPCDCQ96CD2 204 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 HSPBAP1Q96EW2 488 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 LCORQ96JN0 433 aaPredicted RBP15.25■□□□□ 0.03
CDT1-202ENST00000562747 LURAP1Q96LR2 239 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 AMDHD1Q96NU7 426 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 ITPAQ9BY32 194 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 GLIPR2Q9H4G4 154 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 DEPPQ9NTK1 212 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 SEC14L3Q9UDX4 400 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 DTX4Q9Y2E6 619 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 NPFFR2Q9Y5X5 522 aa15.25■□□□□ 0.03
CDT1-202ENST00000562747 CCL21O00585 134 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 ACOX3O15254 700 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 PDPK1O15530 556 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 AKAP10O43572 662 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 LRATO95237 230 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 CCL3P10147 92 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 DRD5P21918 477 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 HTR1EP28566 365 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 CA7P43166 264 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 PPICP45877 212 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 GPR85P60893 370 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 EMX2Q04743 252 aa15.24■□□□□ 0.03
CDT1-202ENST00000562747 IL23RQ5VWK5 629 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms