RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 LRTOMTQ8WZ04 291 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 LIN37Q96GY3 246 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 HSH2DQ96JZ2 352 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 LRFN5Q96NI6 719 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 BDH2Q9BUT1 245 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 TRIM45Q9H8W5 580 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 ADAP2Q9NPF8 381 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 NECTIN3Q9NQS3 549 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 A0A0G2JPF8 293 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 TCRBV16S1A1N1A0A5B0 115 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 HNRNPCL2B2RXH8 293 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 HNRNPCL3B7ZW38 293 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 TPST1O60507 370 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 JRKO75564 520 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 GCM2O75603 506 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SERPINB7O75635 380 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 PGM3O95394 542 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 TIAF1O95411 115 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 CBX7O95931 251 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SEMG1P04279 462 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 CAPNS1P04632 268 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 CT62P0C5K7 136 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 HNRNPCL4P0DMR1 293 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ETS2P15036 469 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 AGXTP21549 392 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 PEX2P28328 305 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SOX18P35713 384 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SELENOWP63302 87 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ZNHIT3Q15649 155 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ELAVL1Q15717 326 aaKnown RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ZNF385CQ66K41 422 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 HEPHL1Q6MZM0 1159 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 PIP4P1Q86T03 277 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ARMC8Q8IUR7 673 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 PLPP5Q8NEB5 264 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 C16orf58Q96GQ5 468 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ART5Q96L15 291 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 YIPF4Q9BSR8 244 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SLC26A1Q9H2B4 701 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 PIGUQ9H490 435 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 CACYBPQ9HB71 228 aaKnown RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 APMAPQ9HDC9 416 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 SLC39A1Q9NY26 324 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 DNAJB9Q9UBS3 223 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.28
COMMD4-205ENST00000562310 BAG5Q9UL15 447 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 LAMA1P25391 3075 aa13.33□□□□□ -0.28
COMMD4-205ENST00000562310 OTOGLQ3ZCN5 2332 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 MYOCOSA0A1B0GUC4 107 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 M0QX08 132 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 CLOCKO15516 846 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 ALBP02768 609 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 FABP3P05413 133 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 ACP2P11117 423 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 TNNI3P19429 210 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 CRYBA2P53672 197 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 FUT5Q11128 374 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 FUT7Q11130 342 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 EIF3IQ13347 325 aaKnown RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 MAPK11Q15759 364 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 SYPL1Q16563 259 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 NKG7Q16617 165 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 GRAMD1BQ3KR37 738 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 GPAT3Q53EU6 434 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 PIWIL3Q7Z3Z3 882 aaKnown RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 GALNT10Q86SR1 603 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 SLC44A2Q8IWA5 706 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 COX18Q8N8Q8 333 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 CHDHQ8NE62 594 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 OR52R1Q8NGF1 315 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 OR14A16Q8NHC5 309 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 GEMIN6Q8WXD5 167 aaKnown RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 SLC9A6Q92581 669 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 PMM1Q92871 262 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 EME1Q96AY2 570 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 FBXL20Q96IG2 436 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms