RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CALCOCO2Q13137 446 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 SNTA1Q13424 505 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 SLMAPQ14BN4 828 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 KBTBD12Q3ZCT8 623 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 SLC30A6Q6NXT4 461 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 METTL2BQ6P1Q9 378 aaKnown RBP10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 NUP54Q7Z3B4 507 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 ADGRE4PQ86SQ3 457 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 PPM1NQ8N819 430 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 FAM83FQ8NEG4 500 aaPredicted RBP10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 OR4K14Q8NGD5 310 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 NXNL1Q96CM4 212 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 UCN2Q96RP3 112 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 SERPINI1Q99574 410 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 TM9SF2Q99805 663 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 ERP44Q9BS26 406 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 RBM24Q9BX46 236 aaKnown RBP10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 IPPKQ9H8X2 491 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 CFL2Q9Y281 166 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 ACOT9Q9Y305 439 aa10.78□□□□□ -0.68
CARMIL3-204ENST00000561354 FLNAP21333 2647 aaKnown RBP10.77□□□□□ -0.68
CARMIL3-204ENST00000561354 A0A1B0GTL3 188 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 SH3D21A4FU49 640 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 FAM171A2A8MVW0 826 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 SNPHO15079 494 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 PPM1BO75688 479 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GBAP04062 536 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GFAPP14136 432 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 CPMP14384 443 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 S1PR1P21453 382 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 NT5EP21589 574 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 SOX18P35713 384 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 XKP51811 444 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 NEK2P51955 445 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 EEF1A1P68104 462 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GTF2H2Q13888 395 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 PFKFB4Q16877 469 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 C6orf163Q5TEZ5 329 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 EEF1A1P5Q5VTE0 462 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GTF2H2CQ6P1K8 395 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 SCIMPQ6UWF3 145 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 ENPP6Q6UWR7 440 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 ANGPTL8Q6UXH0 198 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 YRDCQ86U90 279 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 CXorf67Q86X51 503 aaPredicted RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 PRR22Q8IZ63 422 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 CENPLQ8N0S6 344 aaPredicted RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 WNT2BQ93097 391 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 HGDQ93099 445 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 ARSGQ96EG1 525 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 TUBA1CQ9BQE3 449 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 OR2B2Q9GZK3 357 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 NXF5Q9H1B4 397 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 PIGMQ9H3S5 423 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 METTL7AQ9H8H3 244 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 GALNT8Q9NY28 637 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 ADAM29Q9UKF5 820 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 NFU1Q9UMS0 254 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 EXO1Q9UQ84 846 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 RNF11Q9Y3C5 154 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 TNPO3Q9Y5L0 923 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 EXPH5Q8NEV8 1989 aa10.77□□□□□ -0.69
CARMIL3-204ENST00000561354 A0A087X1B8 175 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 A8MXE2 369 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 CASKO14936 926 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 ARHGEF9O43307 516 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 ICOSLGO75144 302 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 CBR3O75828 277 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 CLDN9O95484 217 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 C2P06681 752 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 HEXAP06865 529 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 PORP16435 677 aaPredicted RBP10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 CHMP24386 653 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 PTGDSP41222 190 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 PCYT1AP49585 367 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 MGAT2Q10469 447 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 MAP4K2Q12851 820 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 GAB1Q13480 694 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 NAB1Q13506 487 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 ACAP2Q15057 778 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 POU4F3Q15319 338 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 FAM83EQ2M2I3 478 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 PRICKLE4Q2TBC4 344 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 C10orf62Q5T681 223 aaPredicted RBP10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 CLEC9AQ6UXN8 241 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 Q71RC1 249 aaPredicted RBP10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 GOLGA7Q7Z5G4 137 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 LRRC75A-AS1Q8N1F1 130 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 TRPC4APQ8TEL6 797 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 SLC44A1Q8WWI5 657 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 IFT81Q8WYA0 676 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 NODALQ96S42 347 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 PIP5K1AQ99755 562 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 OSBPL11Q9BXB4 747 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 DPH5Q9H2P9 285 aa10.76□□□□□ -0.69
CARMIL3-204ENST00000561354 AHSPQ9NZD4 102 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms