RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ACKR4Q9NPB9 350 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 PCSK1NQ9UHG2 260 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 AMACRQ9UHK6 382 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 POLG2Q9UHN1 485 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 ASF1AQ9Y294 204 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 TDRKHQ9Y2W6 561 aaKnown RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 MAGED1Q9Y5V3 778 aaPredicted RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 LYSTQ99698 3801 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CSMD3Q7Z407 3707 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 A0A0U1RQJ8 604 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 FAM237AA0A1B0GTK4 181 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 OR2A25A4D2G3 310 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 H0YIG0 161 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 BUD23O43709 281 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 PRKNO60260 465 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 TNFSF13O75888 250 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 OR6B1O95007 311 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 RCBTB2O95199 551 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ANXA5P08758 320 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ATP1B2P14415 290 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 HNF1AP20823 631 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CMA1P23946 247 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CCNCP24863 283 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 MIPP30301 263 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 PKLRP30613 574 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 AKT1P31749 480 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 UGT2B10P36537 528 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 XCR1P46094 333 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CPA2P48052 419 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ME1P48163 572 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 DNASE1L1P49184 302 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 THBS3P49746 956 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 GPR143P51810 404 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 NEK2P51955 445 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TIAL1Q01085 375 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERC1-211ENST00000560983 FMO1Q01740 532 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CRYZQ08257 329 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 CTBP1Q13363 440 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 FAM53BQ14153 422 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ABRAXAS2Q15018 415 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 SEC23BQ15437 767 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 PGGHGQ32M88 737 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 PLA1AQ53H76 456 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZNF658Q5TYW1 1059 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZDHHC20Q5W0Z9 365 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 KCTD11Q693B1 232 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ADAM5Q6NVV9 412 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 PRSS41Q7RTY9 318 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 PHF13Q86YI8 300 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 PSTKQ8IV42 348 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 TMEM156Q8N614 296 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 SLC15A4Q8N697 577 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CSNK1A1LQ8N752 337 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 BANPQ8N9N5 519 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 APCDD1LQ8NCL9 501 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 OR9A4Q8NGU2 314 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 NEIL3Q8TAT5 605 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 WIPF2Q8TF74 440 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 SMAP2Q8WU79 429 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 SLC22A18Q96BI1 424 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 FAF2Q96CS3 445 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 IMP4Q96G21 291 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZC3HAV1LQ96H79 300 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 WDYHV1Q96HA8 205 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CCDC138Q96M89 665 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 IL17FQ96PD4 163 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 MCEEQ96PE7 176 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TSGA13Q96PP4 275 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 OR2A5Q96R48 311 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 MED18Q9BUE0 208 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 SELENOOQ9BVL4 669 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 DPCDQ9BVM2 203 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 SFXN3Q9BWM7 321 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 DEFB126Q9BYW3 111 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TRIM5Q9C035 493 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 BRINP2Q9C0B6 783 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 DRC3Q9H069 523 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 EXO5Q9H790 373 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TRIM36Q9NQ86 728 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZNHIT6Q9NWK9 470 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 ADAM22Q9P0K1 906 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 CIDEBQ9UHD4 219 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZNF223Q9UK11 482 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 DTX4Q9Y2E6 619 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 TTLL3Q9Y4R7 772 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 FREM1Q5H8C1 2179 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 RAI1Q7Z5J4 1906 aaPredicted RBP3.36□□□□□ -1.87
HERC1-211ENST00000560983 DNAJC13O75165 2243 aa3.36□□□□□ -1.87
HERC1-211ENST00000560983 ZNF407Q9C0G0 2248 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ROS1P08922 2347 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 IGKV1-8A0A0C4DH67 115 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 LOC285095A0A1B0GVY8 99 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 A0A1W2PPV9 198 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 MAGEB17A8MXT2 336 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 P2RX6O15547 441 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ZNF354AO60765 605 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms