RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NR2C2APQ86WQ0 139 aa15.58■□□□□ 0.09
TPM1-228ENST00000560975 LILRA3Q8N6C8 439 aaPredicted RBP15.58■□□□□ 0.09
TPM1-228ENST00000560975 SAMD12Q8N8I0 201 aa15.58■□□□□ 0.09
TPM1-228ENST00000560975 IL17RCQ8NAC3 791 aa15.58■□□□□ 0.09
TPM1-228ENST00000560975 BRI3BPQ8WY22 251 aa15.58■□□□□ 0.09
TPM1-228ENST00000560975 LINC00052Q96N35 136 aa15.58■□□□□ 0.09
TPM1-228ENST00000560975 SMAD5Q99717 465 aaKnown RBP15.58■□□□□ 0.09
TPM1-228ENST00000560975 HLA-DPB1P04440 258 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 MPC1LP0DKB6 136 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 PREPP48147 710 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 PUDPQ08623 228 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 HECTD3Q5T447 861 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 CD200R1LQ6Q8B3 271 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 GPAT4Q86UL3 456 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 MS4A15Q8N5U1 240 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 DBF4BQ8NFT6 615 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 OR4K5Q8NGD3 323 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 NEIL2Q969S2 332 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 MS4A7Q9GZW8 240 aaPredicted RBP15.58■□□□□ 0.08
TPM1-228ENST00000560975 CUEDC1Q9NWM3 386 aaPredicted RBP15.58■□□□□ 0.08
TPM1-228ENST00000560975 STOX2Q9P2F5 926 aaPredicted RBP15.58■□□□□ 0.08
TPM1-228ENST00000560975 PRKAB1Q9Y478 270 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 SLC19A2O60779 497 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 SLC16A8O95907 504 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 IL3P08700 152 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 HSD3B1P14060 373 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 HSD3B2P26439 372 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 PTBP1P26599 531 aaKnown RBP eCLIP15.58■□□□□ 0.085e-7■■■□□ 15.6
TPM1-228ENST00000560975 GIFP27352 417 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 SLC6A11P48066 632 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 CCR6P51684 374 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 RAB40BQ12829 278 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 RIN1Q13671 783 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 ZSWIM7Q19AV6 140 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 KIAA1161Q6NSJ0 714 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 CFAP77Q6ZQR2 320 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 KANSL1Q7Z3B3 1105 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 SERINC5Q86VE9 423 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 ARIH2OSQ8N7S6 290 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 NXPE2Q96DL1 559 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 METTL2AQ96IZ6 378 aaKnown RBP15.58■□□□□ 0.08
TPM1-228ENST00000560975 SLC7A5P2Q9GIP4 190 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 SLC6A16Q9GZN6 736 aa15.58■□□□□ 0.08
TPM1-228ENST00000560975 A0A1W2PPL8 197 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 C7orf66A4D0T2 115 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 BET1O15155 118 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 PRODHO43272 600 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SSNA1O43805 119 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 ATP1B2P14415 290 aaPredicted RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 SLC1A3P43003 542 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 CAMK2DQ13557 499 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 MBTPS1Q14703 1052 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 LYPD4Q6UWN0 246 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SZRD1Q7Z422 152 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 COMTD1Q86VU5 262 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 FBXW5Q969U6 566 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 C12orf66Q96MD2 445 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SECISBP2Q96T21 854 aaKnown RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 DPAGT1Q9H3H5 408 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 MIEF1Q9NQG6 463 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 KCMF1Q9P0J7 381 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 PTGFRNQ9P2B2 879 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SEC14L3Q9UDX4 400 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 AGAP14A8MT82 685 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SGTAO43765 313 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 PPM1BO75688 479 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 TCRBP04435 133 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 MLLT1Q03111 559 aaPredicted RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 PTSQ03393 145 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SP140Q13342 867 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 ARHGAP15Q53QZ3 475 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 MED27Q6P2C8 311 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 ADGRG3Q86Y34 549 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 KLBQ86Z14 1044 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 ST8SIA4Q92187 359 aa15.57■□□□□ 0.08
TPM1-228ENST00000560975 SMG7Q92540 1137 aaKnown RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 FGF20Q9NP95 211 aaPredicted RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 EXOSC1Q9Y3B2 195 aaKnown RBP15.57■□□□□ 0.08
TPM1-228ENST00000560975 TEX46H3BTG2 121 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 CD3GP09693 182 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 ACSM4P0C7M7 580 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 AHCYP23526 432 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 TLE2Q04725 743 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 MTFR2Q6P444 385 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 SLC36A4Q6YBV0 504 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 CBARPQ8N350 705 aaPredicted RBP15.56■□□□□ 0.08
TPM1-228ENST00000560975 SRFBP1Q8NEF9 429 aaKnown RBP15.56■□□□□ 0.08
TPM1-228ENST00000560975 SPRYD4Q8WW59 207 aaPredicted RBP15.56■□□□□ 0.08
TPM1-228ENST00000560975 PDXPQ96GD0 296 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 ZSWIM3Q96MP5 696 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 FNDC11Q9BVV2 318 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 SH2B3Q9UQQ2 575 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 MRPS7Q9Y2R9 242 aaKnown RBP15.56■□□□□ 0.08
TPM1-228ENST00000560975 MAB21L2Q9Y586 359 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 ZNF840PA6NDX5 716 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 ST3GAL2Q16842 350 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 CD276Q5ZPR3 534 aa15.56■□□□□ 0.08
TPM1-228ENST00000560975 HDDC2Q7Z4H3 204 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms