RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 DEPDC1Q5TB30 811 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ARHGAP40Q5TG30 622 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FAM171A1Q5VUB5 890 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SDHAF4Q5VUM1 108 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 LYPLAL1Q5VWZ2 237 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLX4IPQ5VYV7 408 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TMEM236Q5W0B7 351 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 IL31Q6EBC2 164 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 OR2T5Q6IEZ7 315 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CCSAPQ6IQ19 270 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 CES5AQ6NT32 575 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NEK5Q6P3R8 708 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NCEH1Q6PIU2 408 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C19orf48Q6RUI8 117 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SCIMPQ6UWF3 145 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 MACC1Q6ZN28 852 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TPGS1Q6ZTW0 290 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TUBA1AQ71U36 451 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 LRRC8DQ7L1W4 858 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 EIF3MQ7L2H7 374 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC46A3Q7Z3Q1 461 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PPP1R32Q7Z5V6 425 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 BCDIN3DQ7Z5W3 292 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 UBE2Q1Q7Z7E8 422 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZBTB46Q86UZ6 589 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CYP4Z1Q86W10 505 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SERPINA9Q86WD7 417 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PTOV1Q86YD1 416 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZNF280BQ86YH2 543 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ARMC8Q8IUR7 673 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FAM217AQ8IXS0 508 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KLHDC8AQ8IYD2 350 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CBARPQ8N350 705 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 TCAIMQ8N3R3 496 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DNAJC22Q8N4W6 341 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZBTB2Q8N680 514 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KRTCAP2Q8N6L1 136 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TTC29Q8NA56 475 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 OR8J2Q8NGG1 315 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 OR2T29Q8NH02 315 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 OR10A6Q8NH74 314 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RHOXF1Q8NHV9 184 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 METTL6Q8TCB7 284 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CSGALNACT1Q8TDX6 532 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C2orf15Q8WU43 125 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 NUDCD2Q8WVJ2 157 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 APH1BQ8WW43 257 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RORBQ92753 470 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RPL3LQ92901 407 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NCLNQ969V3 563 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC25A28Q96A46 364 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ESAMQ96AP7 390 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 EID2BQ96D98 161 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RMDN1Q96DB5 314 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FAM120BQ96EK7 910 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 C11orf24Q96F05 449 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 PYURFQ96I23 114 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 METTL2AQ96IZ6 378 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 ITCHQ96J02 903 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C7orf34Q96L11 122 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SMIM14Q96QK8 99 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 OR52E6Q96RD3 313 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 LYSMD1Q96S90 227 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 YME1L1Q96TA2 773 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HBEGFQ99075 208 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RAD9AQ99638 391 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 BARD1Q99728 777 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 CTRCQ99895 268 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 APOL4Q9BPW4 351 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CLSTN3Q9BQT9 956 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RHNO1Q9BSD3 238 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HTATIP2Q9BUP3 242 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ITPAQ9BY32 194 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ASPSCR1Q9BZE9 553 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DPY30Q9C005 99 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CLPBQ9H078 707 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ADNPQ9H2P0 1102 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 MMP27Q9H306 513 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DSN1Q9H410 356 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PIF1Q9H611 641 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PARVBQ9HBI1 364 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 IL1RAPQ9NPH3 570 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLAMF7Q9NQ25 335 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC6A13Q9NSD5 602 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FARSBQ9NSD9 589 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 EXD2Q9NVH0 621 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FAM120CQ9NX05 1096 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 MARCH5Q9NX47 278 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SCN3BQ9NY72 215 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ANKMY1Q9P2S6 941 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ERVK-18Q9QC07 812 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 OPTCQ9UBM4 332 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KLQ9UEF7 1012 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 STOML2Q9UJZ1 356 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RPS6KA6Q9UK32 745 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ICAM5Q9UMF0 924 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GABRQQ9UN88 632 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DLGAP4Q9Y2H0 992 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PADI2Q9Y2J8 665 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms