RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 HOXC5Q00444 222 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 NNATQ16517 81 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 NDUFA9Q16795 377 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 MFSD12Q6NUT3 480 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 SHQ1Q6PI26 577 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 BHLHB9Q6PI77 547 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 C16orf62Q7Z3J2 963 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 PATL1Q86TB9 770 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 OR2L13Q8N349 312 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 MBOAT4Q96T53 435 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 PHOX2BQ99453 314 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 ALOXE3Q9BYJ1 711 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 ANKRD60Q9BZ19 345 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 CUTCQ9NTM9 273 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 MAT2BQ9NZL9 334 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 SUSD2Q9UGT4 822 aa10.17□□□□□ -0.78
SNRPA1-211ENST00000560433 A8MUA0 341 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 TNFRSF11BO00300 401 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RPLP0P05388 317 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ACP2P11117 423 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ELK4P28324 431 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 DNAJA1P31689 397 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 CAPGP40121 348 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 EXOC3L2Q2M3D2 409 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 FIGNL1Q6PIW4 674 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 Q6ZPB1 254 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 SHISA6Q6ZSJ9 500 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 TSPYL5Q86VY4 417 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 SVOPLQ8N434 492 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ATG16L2Q8NAA4 619 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 OR9Q2Q8NGE9 314 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 OR4C6Q8NH72 309 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 SFXN5Q8TD22 340 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 TANKQ92844 425 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RBM4BQ9BQ04 359 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RBM4Q9BWF3 364 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ACTRT3Q9BYD9 372 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RIBC2Q9H4K1 309 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ZSCAN32Q9NX65 697 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GIN1Q9NXP7 522 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 LYVE1Q9Y5Y7 322 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 FER1L5A0AVI2 2057 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 H3BMH7 237 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ZNF749O43361 778 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 NSA2O95478 260 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 NTN1O95631 604 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 IFNA14P01570 189 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ATP1B1P05026 303 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RNH1P13489 461 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 PTNP21246 168 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 IGFBP5P24593 272 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ARHGDIAP52565 204 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ADARB1P78563 741 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GPLD1P80108 840 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 MGAT2Q10469 447 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 DUSP8Q13202 625 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 PIN1Q13526 163 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GPR68Q15743 365 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 MINDY4Q4G0A6 757 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 VWA2Q5GFL6 755 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 PIWIL3Q7Z3Z3 882 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 HIPK1Q86Z02 1210 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 OR52R1Q8NGF1 315 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GEMIN6Q8WXD5 167 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 PROX1Q92786 737 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RBM18Q96H35 190 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 ZNF607Q96SK3 696 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 CNPPD1Q9BV87 410 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 RAB33BQ9H082 229 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 SLC38A1Q9H2H9 487 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 NECTIN3Q9NQS3 549 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 PRTFDC1Q9NRG1 225 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 FGF21Q9NSA1 209 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 FAM118AQ9NWS6 357 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 KIF17Q9P2E2 1029 aa10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GPR55Q9Y2T6 319 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 GPC6Q9Y625 555 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-211ENST00000560433 A8MVJ9 347 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 IFNW1P05000 195 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 IFNA16P05015 189 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 FPR1P21462 350 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 GPR3P46089 330 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 AVPR1BP47901 424 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 KCNJ5P48544 419 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 EFNA3P52797 238 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 FAM53BQ14153 422 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 ZNF267Q14586 743 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 GRM7Q14831 915 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 NR0B2Q15466 257 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 FHL5Q5TD97 284 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 LGI4Q8N135 537 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 OR4N2Q8NGD1 307 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 APOBEC4Q8WW27 367 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 ZNF285Q96NJ3 590 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms