RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 BTBD9Q96Q07 612 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 LMF2Q9BU23 707 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 OR8D2Q9GZM6 311 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 SERHL2Q9H4I8 314 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 PRORYQ9H606 182 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 ATP13A2Q9NQ11 1180 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 PCDHB14Q9Y5E9 798 aa13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 HEMK1Q9Y5R4 338 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-207ENST00000559309 CDK2AP1O14519 115 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 RFXANKO14593 260 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 TO15178 435 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 DYRK3O43781 588 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 DNAJB5O75953 348 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 NKX2-2O95096 273 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 ABCB1P08183 1280 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CT45A8P0DMV1 189 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CT45A9P0DMV2 189 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 PRKAR1AP10644 381 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 MAGEA8P43361 318 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 PGDP52209 483 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 AP2B1P63010 937 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 PSG6Q00889 435 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 BTBD16Q32M84 506 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CT45A2Q5DJT8 189 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 REP15Q6BDI9 236 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 MFSD12Q6NUT3 480 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 IGFL2Q6UWQ7 119 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 RNF111Q6ZNA4 994 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 TRPM8Q7Z2W7 1104 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 OR52R1Q8NGF1 315 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 OR56A1Q8NGH5 318 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CMTM5Q96DZ9 223 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 MS4A4EQ96PG1 132 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 GPATCH1Q9BRR8 931 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CNPPD1Q9BV87 410 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 ING2Q9H160 280 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 C3orf14Q9HBI5 128 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 VAPAQ9P0L0 249 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 CFL2Q9Y281 166 aa13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 GPR55Q9Y2T6 319 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-207ENST00000559309 EXPH5Q8NEV8 1989 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 LOC100653049A0A140TA62 436 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 TTC36A6NLP5 189 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ANGPT2O15123 496 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ZNF354AO60765 605 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 COQ9O75208 318 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 KRT34O76011 436 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ITGB2P05107 769 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 HMGN2P05204 90 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 BMP2P12643 396 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 PPICP45877 212 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 PRR5P85299 388 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 GTDC1Q4AE62 458 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 RUNDC3AQ59EK9 446 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 LYPD8Q6UX82 237 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 NPSR1Q6W5P4 371 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 HSDL2Q6YN16 418 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 C6orf120Q7Z4R8 191 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 GALNT16Q8N428 558 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 POU5F2Q8N7G0 328 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 LHPPQ9H008 270 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 TRIM45Q9H8W5 580 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 FOLH1BQ9HBA9 442 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 COPS7AQ9UBW8 275 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 PRODH2Q9UF12 536 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 VPS4AQ9UN37 437 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 PCDHGB4Q9UN71 923 aa13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 ASH1LQ9NR48 2969 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-207ENST00000559309 TRBV11-1A0A0K0K1C0 115 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 RNF103-CHMP3A0A140T963 221 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 ZFAND5O76080 213 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 KCNH1O95259 989 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 GSNP06396 782 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 GPX2P18283 190 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 DRD5P21918 477 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 GPC1P35052 558 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 MLF1P58340 268 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 DCAF7P61962 342 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 DEFB109BQ30KR1 87 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 CDC73Q6P1J9 531 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 TRIML2Q8N7C3 387 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 CDRT4Q8N9R6 151 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms