RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 RASL10BQ96S79 203 aa16.15■□□□□ 0.18
TPM1-214ENST00000558544 FOLH1BQ9HBA9 442 aa16.15■□□□□ 0.18
TPM1-214ENST00000558544 ANKRD10Q9NXR5 420 aa16.15■□□□□ 0.18
TPM1-214ENST00000558544 TAS2R9Q9NYW1 312 aa16.15■□□□□ 0.18
TPM1-214ENST00000558544 CSAG2Q9Y5P2 127 aa16.15■□□□□ 0.18
TPM1-214ENST00000558544 NR5A2O00482 541 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 EMC8O43402 210 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 ZNF354AO60765 605 aaPredicted RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 PSMG1O95456 288 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 IL6P05231 212 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 SSR4P51571 173 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 NR0B1P51843 470 aaKnown RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 PRKAG1P54619 331 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 AGKQ53H12 422 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 ZNF468Q5VIY5 522 aaPredicted RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 IGFL3Q6UXB1 125 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 FUNDC1Q8IVP5 155 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 ZNF441Q8N8Z8 693 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 NUP43Q8NFH3 380 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 PSMA8Q8TAA3 256 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 VPS33AQ96AX1 596 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 FAM120BQ96EK7 910 aaKnown RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 BBC3Q96PG8 261 aaPredicted RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 C3orf14Q9HBI5 128 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 EQTNQ9NQ60 294 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 PCDHGB4Q9UN71 923 aa16.14■□□□□ 0.17
TPM1-214ENST00000558544 YARS2Q9Y2Z4 477 aaKnown RBP16.14■□□□□ 0.17
TPM1-214ENST00000558544 DYTNA2CJ06 578 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 DPM1O60762 260 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 NADKO95544 446 aaPredicted RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 CD1EP15812 388 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SOX3P41225 446 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 KCNK10P57789 538 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TUBA3CQ13748 450 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 UBAP2LQ14157 1087 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 RCAN2Q14206 197 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SPDYE7PQ495Y7 208 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TUBA3EQ6PEY2 450 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 GK5Q6ZS86 529 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 WDR53Q7Z5U6 358 aaPredicted RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 HPS6Q86YV9 775 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 ZADH2Q8N4Q0 377 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TMEM156Q8N614 296 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 RBMXL3Q8N7X1 1067 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 OR5AK3PQ8NH89 298 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SLC22A8Q8TCC7 542 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 VSTM2LQ96N03 204 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CCDC115Q96NT0 180 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 UTP23Q9BRU9 249 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 MFRPQ9BY79 579 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TRIM4Q9C037 500 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 RNF32Q9H0A6 362 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 NXF5Q9H1B4 397 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 ZCCHC3Q9NUD5 404 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 BTNL2Q9UIR0 455 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 ERVK-11Q9UQG0 969 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 OR5H15A6NDH6 313 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SNX3O60493 162 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 ERN1O75460 977 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 CASRP41180 1078 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CCT3P49368 545 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 CORO7P57737 925 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 PRR5P85299 388 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 OC90Q02509 493 aaPredicted RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 TP53BP2Q13625 1128 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 PIGGQ5H8A4 983 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 BLOC1S3Q6QNY0 202 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 NPSR1Q6W5P4 371 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TMEM64Q6YI46 380 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 PRR22Q8IZ63 422 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CLEC4FQ8N1N0 589 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CPSF7Q8N684 471 aaKnown RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 FBXO30Q8TB52 745 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SFXN5Q8TD22 340 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 ASB15Q8WXK1 588 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 HAS2Q92819 552 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 TP53INP1Q96A56 240 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 SPDL1Q96EA4 605 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 GIMAP5Q96F15 307 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 LCORQ96JN0 433 aaPredicted RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 MS4A4EQ96PG1 132 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 INPP5KQ9BT40 448 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.13■□□□□ 0.17
TPM1-214ENST00000558544 EPN3Q9H201 632 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.13■□□□□ 0.17
TPM1-214ENST00000558544 NTMQ9P121 344 aa16.13■□□□□ 0.17
TPM1-214ENST00000558544 CHD6Q8TD26 2715 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 KALRNO60229 2985 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 RNF103-CHMP3A0A140T963 221 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 CCDC154A6NI56 674 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 OR6B1O95007 311 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 CAPN3P20807 821 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 TRHRP34981 398 aaPredicted RBP16.12■□□□□ 0.17
TPM1-214ENST00000558544 CD96P40200 585 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 CDKN2CP42773 168 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 PPICP45877 212 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 DCAF7P61962 342 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 GAB1Q13480 694 aa16.12■□□□□ 0.17
TPM1-214ENST00000558544 MAPKAPK3Q16644 382 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms