RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MTX3Q5HYI7 312 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 COX20Q5RI15 118 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 PRAMEF8Q5VWM4 474 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 PRAMEF7Q5VXH5 474 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 SHISA6Q6ZSJ9 500 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 SZRD1Q7Z422 152 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 CLEC4FQ8N1N0 589 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 ZNF615Q8N8J6 731 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 C11orf65Q8NCR3 313 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 OR52R1Q8NGF1 315 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 PNPT1Q8TCS8 783 aaKnown RBP13.86□□□□□ -0.19
VPS18-202ENST00000558474 SLC2A12Q8TD20 617 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 NKD1Q969G9 470 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 MAGED4Q96JG8 741 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 LPAR4Q99677 370 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 LMF2Q9BU23 707 aaKnown RBP13.86□□□□□ -0.19
VPS18-202ENST00000558474 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 SEMA4CQ9C0C4 833 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 A4GALTQ9NPC4 353 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 EXD2Q9NVH0 621 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 ACTR3BQ9P1U1 418 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 COPS7AQ9UBW8 275 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 ERVK-19Q9WJR5 959 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 LIPT1Q9Y234 373 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 POMPQ9Y244 141 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 HEMK1Q9Y5R4 338 aaPredicted RBP13.86□□□□□ -0.19
VPS18-202ENST00000558474 CCDC88CQ9P219 2028 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 KNTC1P50748 2209 aa13.86□□□□□ -0.19
VPS18-202ENST00000558474 MYOCOSA0A1B0GUC4 107 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 HMGN4O00479 90 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 GUSBP08236 651 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ATXN8OSP0DMR3 200 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ARAFP10398 606 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ETFAP13804 333 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 PCGF2P35227 344 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 DLSTP36957 453 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 EMDP50402 254 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 PGDP52209 483 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 SLC37A1P57057 533 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 DMTNQ08495 405 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 MYBPC3Q14896 1274 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ADRM1Q16186 407 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ATAD3BQ5T9A4 648 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 INTS11Q5TA45 600 aaKnown RBP13.85□□□□□ -0.19
VPS18-202ENST00000558474 RNF111Q6ZNA4 994 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 LANCL3Q6ZV70 420 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 IFNEQ86WN2 208 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 PTOV1Q86YD1 416 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ZZZ3Q8IYH5 903 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 HORMAD2Q8N7B1 307 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 RNF148Q8N7C7 305 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 GOLM1Q8NBJ4 401 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 FAM13CQ8NE31 585 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 C17orf47Q8NEP4 570 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 B3GNT7Q8NFL0 401 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 OR8K3Q8NH51 312 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ADAMTS15Q8TE58 950 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ZNF721Q8TF20 911 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 FAM122AQ96E09 287 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 RNF31Q96EP0 1072 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 IP6K3Q96PC2 410 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 TRIM15Q9C019 465 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ZNF700Q9H0M5 742 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 OR51I1Q9H343 314 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 PIGUQ9H490 435 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 GORASP2Q9H8Y8 452 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 CALML5Q9NZT1 146 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 P2RX2Q9UBL9 471 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 SNX13Q9Y5W8 968 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 DMXL1Q9Y485 3027 aa13.85□□□□□ -0.19
VPS18-202ENST00000558474 ACOT8O14734 319 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 GSTA4O15217 222 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 NKX2-2O95096 273 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 CLPSP04118 112 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 ALOX5P09917 674 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 GGT1P19440 569 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 PTGER1P34995 402 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 GPR143P51810 404 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 ELOAQ14241 798 aaKnown RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 EXOSC7Q15024 291 aaKnown RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 EXT1Q16394 746 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 C1orf146Q5VVC0 180 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 LCN8Q6JVE9 175 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 HEPHL1Q6MZM0 1159 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 PAPD4Q6PIY7 484 aaKnown RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 DHFR2Q86XF0 187 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 C10orf111Q8N326 155 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 IL22RA1Q8N6P7 574 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 HIPK4Q8NE63 616 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 NFAM1Q8NET5 270 aaPredicted RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 JADE3Q92613 823 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 PMM1Q92871 262 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 KIAA1143Q96AT1 154 aaPredicted RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 VMP1Q96GC9 406 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 VSTM2LQ96N03 204 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 OR7D2Q96RA2 312 aa13.84□□□□□ -0.19
VPS18-202ENST00000558474 WDR77Q9BQA1 342 aaPredicted RBP13.84□□□□□ -0.19
VPS18-202ENST00000558474 SERHL2Q9H4I8 314 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms