RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 POM121CA8CG34 1229 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PDX1P52945 283 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 FAM124AQ86V42 546 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 OR5D16Q8NGK9 328 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 SUN3Q8TAQ9 357 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZBTB8AQ96BR9 441 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PLD4Q96BZ4 506 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PTPN18Q99952 460 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 MINDY3Q9H8M7 445 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 SARDHQ9UL12 918 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PLEKHM1Q9Y4G2 1056 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 TCHHQ07283 1943 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 TRAV18A0A075B6X5 111 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 YJEFN3A6XGL0 299 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 H7C1Q1 480 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 FADS1O60427 444 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PRNPP04156 253 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 RAB4AP20338 218 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 PSMB1P20618 241 aaKnown RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 CORO1AP31146 461 aaKnown RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 HCCSP53701 268 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 UBE2KP61086 200 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 SOWAHAQ2M3V2 549 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF574Q6ZN55 896 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 MYOCQ99972 504 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 VNN3Q9NY84 501 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 HEBP2Q9Y5Z4 205 aa11.23□□□□□ -0.61
CSPG4P12-201ENST00000558282 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SAP18O00422 153 aaKnown RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 E2F3O00716 465 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 TGOLN2O43493 480 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 RAB40ALP0C0E4 278 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SYN1P17600 705 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SOX3P41225 446 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 NHSL2Q5HYW2 709 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 HFE2Q6ZVN8 426 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 GPAT4Q86UL3 456 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 OR5H2Q8NGV7 314 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 RAB40AQ8WXH6 277 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 RTP4Q96DX8 246 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 NLE1Q9NVX2 485 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 LMO7Q8WWI1 1683 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 ADRB3P13945 408 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SLAMF1Q13291 335 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 TMEM173Q86WV6 379 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 KCT2Q8NC54 265 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 OR6N2Q8NGY6 317 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 OR51B5Q9H339 312 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 FAM212BQ9NTI7 297 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 GPRC5BQ9NZH0 403 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 DIRAS3O95661 229 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 JUNP05412 331 aaKnown RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SYPP08247 313 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SLC26A5P58743 744 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 FCN2Q15485 313 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 TSSK4Q6SA08 328 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 SLC46A3Q7Z3Q1 461 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 ORAI3Q9BRQ5 295 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 INPP5EQ9NRR6 644 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 TMEM39AQ9NV64 488 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 KPTNQ9Y664 436 aa11.22□□□□□ -0.61
CSPG4P12-201ENST00000558282 C17orf113A0A1B0GUU1 675 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF736B4DX44 427 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 M0R2N6 131 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 SLC16A5O15375 505 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 MED6O75586 246 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 MLLT10P55197 1068 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 MFSD13AQ14CX5 517 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 PPA1Q15181 289 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 CCDC71LQ8N9Z2 235 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ARRDC4Q8NCT1 418 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 BBS1Q8NFJ9 593 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 SLC16A10Q8TF71 515 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 TGM7Q96PF1 710 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF587Q96SQ5 575 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 MRPS30Q9NP92 439 aaKnown RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZFP37Q9Y6Q3 630 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 A0A0A6YYH2 397 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 A0A1W2PPK0 400 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 A6NJ64 397 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZNF726A6NNF4 738 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 H3BUI4 141 aa11.21□□□□□ -0.61
CSPG4P12-201ENST00000558282 ZBTB48P10074 688 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms