RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 TNIP2Q8NFZ5 429 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF483Q8TF39 744 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 TM4SF18Q96CE8 201 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 TMCO6Q96DC7 493 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 ERP27Q96DN0 273 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 MTBPQ96DY7 904 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 OMA1Q96E52 524 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 CLEC4MQ9H2X3 399 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 PFDN4Q9NQP4 134 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 FARSBQ9NSD9 589 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 MAT2BQ9NZL9 334 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 KLRF1Q9NZS2 232 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 SLC6A5Q9Y345 797 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 SETD2Q9BYW2 2564 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 AKAP9Q99996 3911 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 EXOC1LA0A1B0GW35 172 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 A8MT66 165 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 GNB5O14775 395 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ABCB7O75027 752 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ICOSLGO75144 302 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 SUPT7LO94864 414 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CYP4B1P13584 511 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 BMP7P18075 431 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CTSSP25774 331 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 KRT20P35900 424 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 EEF1A1P68104 462 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CLCQ05315 142 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 PLCXD2Q0VAA5 305 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 MGAT2Q10469 447 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 GALNT1Q10472 559 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CSTF3Q12996 717 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 EXOSC7Q15024 291 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 FLYWCH1Q4VC44 716 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 WIPI1Q5MNZ9 446 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 EEF1A1P5Q5VTE0 462 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 FNDC7Q5VTL7 733 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 FBXW10Q5XX13 1052 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 LETMD1Q6P1Q0 360 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 FAM111BQ6SJ93 734 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ENPP6Q6UWR7 440 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 SEM1Q6ZVN7 128 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 C1orf52Q8N6N3 182 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 GBP7Q8N8V2 638 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ADCY4Q8NFM4 1077 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 METTL6Q8TCB7 284 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ZPLD1Q8TCW7 415 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 DCAKDQ8WVC6 231 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF592Q92610 1267 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CTHRC1Q96CG8 243 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 TRIB1Q96RU8 372 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 FOXC2Q99958 501 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 OSBPL11Q9BXB4 747 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 UGT2B28Q9BY64 529 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 RASSF1Q9NS23 344 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 GIMAP4Q9NUV9 329 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 CRIM1Q9NZV1 1036 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 DMGDHQ9UI17 866 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF639Q9UID6 485 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 UTS2RQ9UKP6 389 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 EXO1Q9UQ84 846 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 MED13LQ71F56 2210 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
SNRPA1-204ENST00000558020 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 FAM221AA4D161 298 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 TUBAL3A6NHL2 446 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 OR6C70A6NIJ9 312 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 MANBAO00462 879 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 REM1O75628 298 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 OR4F21O95013 312 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 IL18BPO95998 194 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 FREM3P0C091 2139 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 CPN1P15169 458 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 TSPAN8P19075 237 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 DNASE1P24855 282 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 PTPN6P29350 595 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 HMOX2P30519 316 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 MPIP34949 423 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 IST1P53990 364 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 NAGLUP54802 743 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 HEPACAMQ14CZ8 416 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 NNATQ16517 81 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 ERCC6LQ2NKX8 1250 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 TRMT12Q53H54 448 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 EIPR1Q53HC9 387 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 GPRIN3Q6ZVF9 776 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 SLC22A9Q8IVM8 553 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 CTAGE4Q8IX94 777 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 CDYL2Q8N8U2 506 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 OR52R1Q8NGF1 315 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms