RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CLCA3PQ9Y6N3 262 aa15.36■□□□□ 0.05
NEK9-211ENST00000557673 C1orf226A1L170 272 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 NKX2-6A6NCS4 301 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 FAM90A27PA6NNH2 459 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 ACOT7O00154 380 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 HDAC3O15379 428 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 PEX11AO75192 247 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 HOXD4P09016 255 aaPredicted RBP15.35■□□□□ 0.05
NEK9-211ENST00000557673 SSR4P51571 173 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 PMPCAQ10713 525 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 SERTAD2Q14140 314 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 C6orf136Q5SQH8 315 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 SLC48A1Q6P1K1 146 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 IKBIPQ70UQ0 350 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 MAVSQ7Z434 540 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 OR4N5Q8IXE1 308 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 TMEM132CQ8N3T6 1108 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 ZNF321PQ8N8H1 164 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEK9-211ENST00000557673 PIWIL2Q8TC59 973 aaKnown RBP15.35■□□□□ 0.05
NEK9-211ENST00000557673 PTPMT1Q8WUK0 201 aaPredicted RBP15.35■□□□□ 0.05
NEK9-211ENST00000557673 UCN3Q969E3 161 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 TUBGCP3Q96CW5 907 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 PPP1R36Q96LQ0 422 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 UCK2Q9BZX2 261 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 LIN28AQ9H9Z2 209 aaKnown RBP15.35■□□□□ 0.05
NEK9-211ENST00000557673 HEY2Q9UBP5 337 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 ERVK-11Q9UQG0 969 aa15.35■□□□□ 0.05
NEK9-211ENST00000557673 C17orf105B2RV13 164 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 SLCO1B7G3V0H7 640 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 SDHDO14521 159 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 PGRMC2O15173 223 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 ZFAND5O76080 213 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 PDE9AO76083 593 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 KITP10721 976 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 TNNI3P19429 210 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 TACR1P25103 407 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 GPR85P60893 370 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 PLIN5Q00G26 463 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 FAM71E1Q6IPT2 247 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 MDGA2Q7Z553 956 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 WDR75Q8IWA0 830 aaKnown RBP15.34■□□□□ 0.05
NEK9-211ENST00000557673 CHDHQ8NE62 594 aaPredicted RBP15.34■□□□□ 0.05
NEK9-211ENST00000557673 OR5M3Q8NGP4 307 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 OR14A16Q8NHC5 309 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 CDC26Q8NHZ8 85 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 DAZLQ92904 295 aaKnown RBP15.34■□□□□ 0.05
NEK9-211ENST00000557673 C1orf50Q9BV19 199 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 OR8D2Q9GZM6 311 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 CES1P1Q9UKY3 287 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 HRH3Q9Y5N1 445 aa15.34■□□□□ 0.05
NEK9-211ENST00000557673 INTS1Q8N201 2190 aaKnown RBP15.34■□□□□ 0.05
NEK9-211ENST00000557673 A0A1W2PS29 197 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 FAM221AA4D161 298 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 OR14I1A6ND48 311 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 TMEM200CA6NKL6 621 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 TRPC5OSA6NMA1 111 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 WASHC1A8K0Z3 465 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 A8MVJ9 347 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 NADKO95544 446 aaPredicted RBP15.33■□□□□ 0.04
NEK9-211ENST00000557673 GPR75O95800 540 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 BCKDHAP12694 445 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 CD99P14209 185 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 DRD2P14416 443 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 MAPK1P28482 360 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 STT3AP46977 705 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 ALDH9A1P49189 494 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 PPIAP62937 165 aaKnown RBP15.33■□□□□ 0.04
NEK9-211ENST00000557673 PLGLB1Q02325 96 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 MYBPHQ13203 477 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 HEPACAMQ14CZ8 416 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 SMU1Q2TAY7 513 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 HSDL2Q6YN16 418 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 FAM47EQ6ZV65 393 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 SLC22A16Q86VW1 577 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 LRRC34Q8IZ02 419 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 FNDC5Q8NAU1 212 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 MORN4Q8NDC4 146 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 PSD4Q8NDX1 1056 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 OR52N2Q8NGI0 321 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 SLC2A12Q8TD20 617 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 KLHL29Q96CT2 875 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 POM121Q96HA1 1249 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 DEFB127Q9H1M4 99 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 AKTIPQ9H8T0 292 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 HPF1Q9NWY4 346 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 ASIC5Q9NY37 505 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 EHD3Q9NZN3 535 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 EDARQ9UNE0 448 aa15.33■□□□□ 0.04
NEK9-211ENST00000557673 WBP11Q9Y2W2 641 aaKnown RBP15.33■□□□□ 0.04
NEK9-211ENST00000557673 FIGNL2A6NMB9 653 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 WWP2O00308 870 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 ZNF195O14628 629 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 BCKDKO14874 412 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 OR2J2O76002 312 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 ALOX15P16050 662 aaPredicted RBP15.32■□□□□ 0.04
NEK9-211ENST00000557673 DDCP20711 480 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 DNAJA1P31689 397 aaKnown RBP15.32■□□□□ 0.04
NEK9-211ENST00000557673 ERVK-8P63133 956 aa15.32■□□□□ 0.04
NEK9-211ENST00000557673 MAD2L1Q13257 205 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms