RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 DPP10Q8N608 796 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 CDRT4Q8N9R6 151 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 FDCSPQ8NFU4 85 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 OR52R1Q8NGF1 315 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 OR9I1Q8NGQ6 314 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 KAT2AQ92830 837 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 EXTL1Q92935 676 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 BTBD9Q96Q07 612 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 PANX1Q96RD7 426 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 TRIM45Q9H8W5 580 aaPredicted RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 SIRT3Q9NTG7 399 aaPredicted RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 VPS4AQ9UN37 437 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 GMEB1Q9Y692 573 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 FRG2CA6NGY1 282 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 ANGPT2O15123 496 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 DPM1O60762 260 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 KRT75O95678 551 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 AGR2O95994 175 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 PRDX6P30041 224 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 DGKQP52824 942 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 MRPS22P82650 360 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 KLF10Q13118 480 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 STX5Q13190 355 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 TP53BP2Q13625 1128 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 SPDYE7PQ495Y7 208 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 TIGD2Q4W5G0 525 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 PIGGQ5H8A4 983 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 FAM91A1Q658Y4 838 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 OPN5Q6U736 354 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 CCDC197Q8NCU1 140 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 NUP43Q8NFH3 380 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 RP9Q8TA86 221 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 MIPOL1Q8TD10 442 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 HAS2Q92819 552 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 ADIPOR1Q96A54 375 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 VSTM2LQ96N03 204 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 LRRC37BQ96QE4 947 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 UBL7Q96S82 380 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 STACQ99469 402 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 LMF2Q9BU23 707 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 NMUR2Q9GZQ4 415 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC52A3Q9NQ40 469 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 ZCCHC3Q9NUD5 404 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 THUMPD1Q9NXG2 353 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 STMN3Q9NZ72 180 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 MRTO4Q9UKD2 239 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 NDUFAF1Q9Y375 327 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 PCDHGB6Q9Y5F9 930 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.32
SUPT16H-208ENST00000557652 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 A0A096LPI6 279 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 A8MUI8 341 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 HRKO00198 91 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 NR5A2O00482 541 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 ASNA1O43681 348 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 ITGA10O75578 1167 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 LCN1P31025 176 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CDK9P50750 372 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 SSR4P51571 173 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 PSMD4P55036 377 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CYP27C1Q4G0S4 372 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 LRIF1Q5T3J3 769 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 ZADH2Q8N4Q0 377 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 SIRT6Q8N6T7 355 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 GTF2H4Q92759 462 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CMTM5Q96DZ9 223 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 NEURL3Q96EH8 262 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CXorf36Q9H7Y0 433 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 FOLH1BQ9HBA9 442 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 HHATLQ9HCP6 504 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 Q9N2J8 555 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 SERHLQ9NQF3 203 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 FAF1Q9UNN5 650 aaPredicted RBP13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CORO2BQ9UQ03 480 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 SNX8Q9Y5X2 465 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 PIEZO2Q9H5I5 2752 aa13.07□□□□□ -0.32
SUPT16H-208ENST00000557652 CFAP47Q6ZTR5 3102 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms