RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 LRATO95237 230 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 AVPP01185 164 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 IFI6P09912 130 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF24P17028 368 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 DRD5P21918 477 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 MST1P26927 711 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 PTGER1P34995 402 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 PPICP45877 212 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 PSPHP78330 225 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 MRPS35P82673 323 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 EMX2Q04743 252 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 RBPJQ06330 500 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 NTRK2Q16620 822 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 EIF2S3LQ2VIR3 472 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 C4orf48Q5BLP8 95 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 IL23RQ5VWK5 629 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 GFRALQ6UXV0 394 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 BNC2Q6ZN30 1099 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 GK5Q6ZS86 529 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 LRRC34Q8IZ02 419 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 LIX1Q8N485 282 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 CPSF7Q8N684 471 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ZFP62Q8NB50 900 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ZFP28Q8NHY6 868 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 KAT2AQ92830 837 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ARL8AQ96BM9 186 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ZBED6CLQ96FA7 236 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 LCORQ96JN0 433 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 GPR137Q96N19 417 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 FAM173AQ9BQD7 235 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 GLIPR2Q9H4G4 154 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 TAS2R9Q9NYW1 312 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 NOP53Q9NZM5 478 aaKnown RBP11.52□□□□□ -0.57
SLIRP-211ENST00000557623 CNIH4Q9P003 139 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 SH3BP4Q9P0V3 963 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 MAPRE3Q9UPY8 281 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 NPFFR2Q9Y5X5 522 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 HMGB1P1B2RPK0 211 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 NPIPA5E9PKD4 350 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 SLCO1B7G3V0H7 640 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ACOT7O00154 380 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 TFECO14948 347 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PDPK1O15530 556 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 NAGAP17050 411 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 SOX18P35713 384 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 EMDP50402 254 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 GPR85P60893 370 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 DUSP8Q13202 625 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PDE7AQ13946 482 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 RPS6KA2Q15349 733 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PRSS53Q2L4Q9 553 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.51□□□□□ -0.575e-7■■■■□ 21.9
SLIRP-211ENST00000557623 TBCELQ5QJ74 424 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 FAM47EQ6ZV65 393 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 FBXW8Q8N3Y1 598 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 OR2M7Q8NG81 312 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 OR7G2Q8NG99 324 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 SECISBP2Q96T21 854 aaKnown RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 NXF5Q9H1B4 397 aaKnown RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ACSS1Q9NUB1 689 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ATAD3AQ9NVI7 634 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ASIC5Q9NY37 505 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 GIMAP2Q9UG22 337 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 NPIPA1Q9UND3 350 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 DTX4Q9Y2E6 619 aa11.51□□□□□ -0.57
SLIRP-211ENST00000557623 GTF3C1Q12789 2109 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 TRPC5OSA6NMA1 111 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 KLF11O14901 512 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 SCAMP2O15127 329 aaKnown RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 TO15178 435 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 ASNA1O43681 348 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 SNNO75324 88 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 UNC5CO95185 931 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 CCL3P10147 92 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 PRPS1L1P21108 318 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 ABCD3P28288 659 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 GPC1P35052 558 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 MC3RP41968 323 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms