RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FAM32AQ9Y421 112 aaKnown RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 PCDH15Q96QU1 1955 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 IGHV5-10-1A0A0J9YXX1 117 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 A0A1B0GX78 115 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 H0YAE9 185 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 DLGAP1O14490 977 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 DNAJB5O75953 348 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 H6PDO95479 791 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 AK1P00568 194 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 FESP07332 822 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 CHRM4P08173 479 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 GALNSP34059 522 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SOX18P35713 384 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 GRK6P43250 576 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 STT3AP46977 705 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 IST1P53990 364 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 PPP2R2BQ00005 443 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 FUT5Q11128 374 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 MERTKQ12866 999 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SYT16Q17RD7 645 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 RFX4Q33E94 735 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 CHERPQ8IWX8 916 aaKnown RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SHISA5Q8N114 240 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 DHRSXQ8N5I4 330 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 METTL27Q8N6F8 245 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 GATA6Q92908 595 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 RIT1Q92963 219 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 OTUB1Q96FW1 271 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SLC35A4Q96G79 324 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 STACQ99469 402 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ALOXE3Q9BYJ1 711 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ANKRD60Q9BZ19 345 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ARRDC1-AS1Q9H2J1 176 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 PIGUQ9H490 435 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SYNDIG1Q9H7V2 258 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ANKRA2Q9H9E1 313 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 CXorf21Q9HAI6 301 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 CACYBPQ9HB71 228 aaKnown RBP11.67□□□□□ -0.54
SHMT2-233ENST00000557529 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 SH3GLB1Q9Y371 365 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ORC6Q9Y5N6 252 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 KCNE3Q9Y6H6 103 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 ENPP4Q9Y6X5 453 aa11.67□□□□□ -0.54
SHMT2-233ENST00000557529 BDP1A6H8Y1 2624 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 MYOCOSA0A1B0GUC4 107 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CASC3O15234 703 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 DIRAS1O95057 198 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ALBP02768 609 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 THRBP10828 461 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ACP2P11117 423 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 RHCEP18577 417 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 FBLP22087 321 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CAPGP40121 348 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 OR1E2P47887 323 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CHN2P52757 468 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 COL9A2Q14055 689 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 DUSP7Q16829 419 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ZC3H14Q6PJT7 736 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 TMPRSS9Q7Z410 1059 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CARM1Q86X55 608 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CHDHQ8NE62 594 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 GPR32P1Q8NGA4 272 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 APOBEC4Q8WW27 367 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 PMM1Q92871 262 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ZNF354BQ96LW1 612 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 CNBD2Q96M20 576 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 GFM1Q96RP9 751 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 YIPF2Q9BWQ6 316 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 PINK1Q9BXM7 581 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 VNN3Q9NY84 501 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 DHCR7Q9UBM7 475 aaKnown RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 SLC9A8Q9Y2E8 581 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 TMEM184BQ9Y519 407 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-233ENST00000557529 MAU2Q9Y6X3 613 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 U3KQV3 271 aa11.66□□□□□ -0.54
SHMT2-233ENST00000557529 DSPPQ9NZW4 1301 aa11.65□□□□□ -0.54
SHMT2-233ENST00000557529 ASXL3Q9C0F0 2248 aa11.65□□□□□ -0.54
SHMT2-233ENST00000557529 SYNDIG1LA6NDD5 238 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 TTC36A6NLP5 189 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 A8MVJ9 347 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 TNFRSF11BO00300 401 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 SYT5O00445 386 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.55
SHMT2-233ENST00000557529 CBX7O95931 251 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 ALPPP05187 535 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 LYNP07948 512 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 CT62P0C5K7 136 aa11.65□□□□□ -0.55
SHMT2-233ENST00000557529 TNFRSF1BP20333 461 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms