RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SERINC2Q96SA4 455 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SLC6A7Q99884 636 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 POTEKPQ9BYX7 375 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 MMP27Q9H306 513 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CDC42EP4Q9H3Q1 356 aaKnown RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CHRAC1Q9NRG0 131 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CHMP5Q9NZZ3 219 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 XPR1Q9UBH6 696 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 BZW2Q9Y6E2 419 aaKnown RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 DYNC2H1Q8NCM8 4307 aaKnown RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 LRIT2A6NDA9 550 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 CCT8L1PA6NM43 557 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 OR6C76A6NM76 312 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 PSTPIP1O43586 416 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SS18L1O75177 396 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 ABCB1P08183 1280 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 NUDT17P0C025 328 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 ENO3P13929 434 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 KRT15P19012 456 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 ARNTP27540 789 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 ABCD3P28288 659 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 KCNC1P48547 511 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 CHN2P52757 468 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 CLDN20P56880 219 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 NRG3P56975 720 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 EEFSECP57772 596 aaKnown RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 IGLV3-21P80748 117 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 GLCCI1Q86VQ1 547 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 CPNE9Q8IYJ1 553 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 GPATCH11Q8N954 259 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 FAM71DQ8N9W8 422 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 PEX13Q92968 403 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 HGDQ93099 445 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 GMPPAQ96IJ6 420 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SORCS2Q96PQ0 1159 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SNX18Q96RF0 628 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 HBEGFQ99075 208 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 MAPKAP1Q9BPZ7 522 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 AIF1LQ9BQI0 150 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SUCNR1Q9BXA5 334 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 C1QTNF5Q9BXJ0 243 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 HSD3B7Q9H2F3 369 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 COPS7BQ9H9Q2 264 aaPredicted RBP8.32□□□□□ -1.08
NEDD1-211ENST00000557454 TREX1Q9NSU2 369 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 FBXO34Q9NWN3 711 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 NPAP1Q9NZP6 1156 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 IKZF3Q9UKT9 509 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 MED16Q9Y2X0 877 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SPEF1Q9Y4P9 236 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 PPIAL4AQ9Y536 164 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
NEDD1-211ENST00000557454 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PRAMEF25A6NGN4 478 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 EFCAB8A8MWE9 144 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PSMD3O43242 534 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 ZIC3O60481 467 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 NTN1O95631 604 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 TMEM253P0C7T8 217 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 TPSB2P20231 275 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 IL11P20809 199 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SSTR4P31391 388 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SLC1A1P43005 524 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 CCNIQ14094 377 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 TPSAB1Q15661 275 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 STK11Q15831 433 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 NNATQ16517 81 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 HLA-DQA1Q5Y7H0 255 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 MRNIPQ6NTE8 343 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 CASC4Q6P4E1 433 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SLC22A25Q6T423 547 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SDCCAG8Q86SQ7 713 aaPredicted RBP8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PLCZ1Q86YW0 608 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 KATNAL2Q8IYT4 538 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 GABRG1Q8N1C3 465 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF540Q8NDQ6 660 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 OR2L5Q8NG80 312 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 OR56A3Q8NH54 315 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 HPS1Q92902 700 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 RBM18Q96H35 190 aaKnown RBP8.31□□□□□ -1.08
NEDD1-211ENST00000557454 TRMOQ9BU70 441 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 HDHD5Q9BXW7 423 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 REXO4Q9GZR2 422 aaKnown RBP8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SLITRK2Q9H156 845 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 STMN4Q9H169 189 aaPredicted RBP8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PELI2Q9HAT8 420 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PDP1Q9P0J1 537 aaPredicted RBP8.31□□□□□ -1.08
NEDD1-211ENST00000557454 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 SPACA6W5XKT8 324 aa8.31□□□□□ -1.08
NEDD1-211ENST00000557454 B4DXG7 233 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 PJA2O43164 708 aa8.3□□□□□ -1.08
NEDD1-211ENST00000557454 LILRA1O75019 489 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms