RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RPS13P62277 151 aaKnown RBP11.31□□□□□ -0.6
PSEN1-221ENST00000557293 SIRPAP78324 504 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 SNTA1Q13424 505 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 VEZF1Q14119 521 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 OR4D1Q15615 310 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 BCL2A1Q16548 175 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 CHRFAM7AQ494W8 412 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-221ENST00000557293 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 MED27Q6P2C8 311 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 CCDC137Q6PK04 289 aaKnown RBP11.31□□□□□ -0.6
PSEN1-221ENST00000557293 SCIMPQ6UWF3 145 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 FRA10AC1Q70Z53 315 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 TCAIMQ8N3R3 496 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 MS4A14Q96JA4 679 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 SLC39A3Q9BRY0 314 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 OSBPL11Q9BXB4 747 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 DERL2Q9GZP9 239 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 DDX31Q9H8H2 851 aaKnown RBP11.31□□□□□ -0.6
PSEN1-221ENST00000557293 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 PPANQ9NQ55 473 aaKnown RBP11.31□□□□□ -0.6
PSEN1-221ENST00000557293 PSD3Q9NYI0 1048 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 TAS2R10Q9NYW0 307 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 FBXL2Q9UKC9 423 aa11.31□□□□□ -0.6
PSEN1-221ENST00000557293 H0YC42 278 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 GPRIN2O60269 458 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 FAM58BPP0C7Q3 252 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 DANCRP0C864 163 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 IVDP26440 423 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 CNTFP26441 200 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 SRD5A2P31213 254 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 GCKP35557 465 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 ACVR1BP36896 505 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-221ENST00000557293 ELK3P41970 407 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 ARFIP1P53367 373 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 SUCLG1P53597 346 aaKnown RBP11.3□□□□□ -0.6
PSEN1-221ENST00000557293 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-221ENST00000557293 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 OR2A2Q6IF42 318 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 GPSM1Q86YR5 675 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 PLCZ1Q86YW0 608 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 GALNT12Q8IXK2 581 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 HUS1BQ8NHY5 278 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 CAVIN3Q969G5 261 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 OMA1Q96E52 524 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 ZNF845Q96IR2 970 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-221ENST00000557293 CD244Q9BZW8 370 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 SLCO5A1Q9H2Y9 848 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 CNOT10Q9H9A5 744 aaKnown RBP11.3□□□□□ -0.6
PSEN1-221ENST00000557293 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
PSEN1-221ENST00000557293 A0A096LNT2 108 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 SLC22A20A6NK97 555 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 C17orf51A8MQB3 221 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 DNALI1O14645 258 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 CCNT2O60583 730 aaKnown RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 NDUFS7O75251 213 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 NR2F6P10588 404 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 CD1DP15813 335 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 IDUAP35475 653 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 PIK3CBP42338 1070 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 HMGCS1Q01581 520 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 FRG1Q14331 258 aaKnown RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 NNATQ16517 81 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 FAM111BQ6SJ93 734 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 MILR1Q7Z6M3 343 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 OR7G1Q8NGA0 311 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 UBE2E3Q969T4 207 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 ZBED6CLQ96FA7 236 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 CFAP36Q96G28 342 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 KLHL4Q9C0H6 718 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 POPDC3Q9HBV1 291 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 LYARQ9NX58 379 aaKnown RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 MOCS1Q9NZB8 636 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 ZNF639Q9UID6 485 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
PSEN1-221ENST00000557293 TSC22D4Q9Y3Q8 395 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 TEX264Q9Y6I9 313 aa11.29□□□□□ -0.6
PSEN1-221ENST00000557293 PRAMEF25A6NGN4 478 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 TNFRSF21O75509 655 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 SOD3P08294 240 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 SERPINB1P30740 379 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 KCNJ5P48544 419 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 XKP51811 444 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 RAP1GDS1P52306 607 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 GAS1P54826 345 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
PSEN1-221ENST00000557293 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms