RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SGK3Q96BR1 496 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF696Q9H7X3 374 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF586Q9NXT0 402 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 DNAJC5BQ9UF47 199 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 CD163L1Q9NR16 1453 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 A0A1W2PPL8 197 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 EIF3FO00303 357 aaPredicted RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 LAG3P18627 525 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ADRA1BP35368 520 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PAN3Q58A45 887 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SLC2A12Q8TD20 617 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SLCO2A1Q92959 643 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SLC25A44Q96H78 314 aaPredicted RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 OR2M2Q96R28 347 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 POPDC3Q9HBV1 291 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SLC2A8Q9NY64 477 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PAGE3Q5JUK9 113 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 DEFB128Q7Z7B8 93 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 DAZLQ92904 295 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 CTDNEP1O95476 244 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 EVI2BP34910 448 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 H3F3AP84243 136 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 DCUN1D3Q8IWE4 304 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 C1orf87Q8N0U7 546 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 NT5C3BQ969T7 300 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 KCTD12Q96CX2 325 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 UHRF1Q96T88 793 aaPredicted RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SEMA4CQ9C0C4 833 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ASB3Q9Y575 518 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 LMO7Q8WWI1 1683 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 GABARAPH6UMI1 98 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SCO1O75880 301 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 GABARAPO95166 117 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SPDEFO95238 335 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 METAP1DQ6UB28 335 aaPredicted RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 NPNTQ6UXI9 565 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 STEAP2Q8NFT2 490 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 MFFQ9GZY8 342 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ECI2O75521 394 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ADH4P08319 380 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 GLO1Q04760 184 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ENDOVQ8N8Q3 282 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 PGAM5Q96HS1 289 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ACO2Q99798 780 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 C1orf123Q9NWV4 160 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 TXNL1O43396 289 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 PCCBP05166 539 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 TMEM173Q86WV6 379 aaPredicted RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 OR5L2Q8NGL0 311 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 PAPOLGQ9BWT3 736 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ACOXLQ9NUZ1 547 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 TXNL4BQ9NX01 149 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 TMEM181Q9P2C4 612 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 LRRTM4Q86VH4 590 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 PHOSPHO1Q8TCT1 267 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 DERL2Q9GZP9 239 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SCPEP1Q9HB40 452 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SLC22A14Q9Y267 594 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 WIF1Q9Y5W5 379 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 A0A0U1RQK1 487 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 LYRM1O43325 122 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 FMO6PO60774 539 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 OR4F21O95013 312 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 MT-ND4LP03901 98 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 HK3P52790 923 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 NBPF12Q5TAG4 269 aaPredicted RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 NIPA2Q8N8Q9 360 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 OR13J1Q8NGT2 312 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 GAB3Q8WWW8 586 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SLAMF9Q96A28 289 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 NUS1Q96E22 293 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 C10orf90Q96M02 699 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 MAN2C1Q9NTJ4 1040 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 LIN7CQ9NUP9 197 aaKnown RBP8.46□□□□□ -1.06
SYNE3-205ENST00000557275 SLC17A6Q9P2U8 582 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 POU2F3Q9UKI9 436 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 ADGRB3O60242 1522 aa8.46□□□□□ -1.06
SYNE3-205ENST00000557275 FAM237AA0A1B0GTK4 181 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SDC3O75056 442 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CSF2P04141 144 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 MC3RP41968 323 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 EPHA4P54764 986 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ENPP6Q6UWR7 440 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF705AQ6ZN79 300 aaPredicted RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF572Q7Z3I7 529 aaPredicted RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 UEVLDQ8IX04 471 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR13C9Q8NGT0 318 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZDHHC1Q8WTX9 485 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ARMC5Q96C12 935 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 H3BSA7 217 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 GOT2P00505 430 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 FHP07954 510 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 JUPP14923 745 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 IGFBP4P22692 258 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms