RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SMAD5Q99717 465 aaKnown RBP15.28■□□□□ 0.04
PCNX4-213ENST00000556907 SEMA4CQ9C0C4 833 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 TAS2R9Q9NYW1 312 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 SLAMF8Q9P0V8 285 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 TMEM181Q9P2C4 612 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 COPS7AQ9UBW8 275 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 VPS4AQ9UN37 437 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 ZNF451Q9Y4E5 1061 aa15.28■□□□□ 0.04
PCNX4-213ENST00000556907 KMT2BQ9UMN6 2715 aaPredicted RBP15.28■□□□□ 0.04
PCNX4-213ENST00000556907 CACNA1GO43497 2377 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 BCAS2O75934 225 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 ANP32DO95626 131 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 IFI6P09912 130 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 EFNA1P20827 205 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 PGM1P36871 562 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SLC7A2P52569 658 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 HBA1P69905 142 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 MAP4K2Q12851 820 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 GALNT12Q8IXK2 581 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 ULK2Q8IYT8 1036 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SLC5A8Q8N695 610 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 APCDD1LQ8NCL9 501 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 OR7G1Q8NGA0 311 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SUN3Q8TAQ9 357 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 ZNF675Q8TD23 568 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SENP5Q96HI0 755 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 ZNF354BQ96LW1 612 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 AMDHD1Q96NU7 426 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 BBS4Q96RK4 519 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 THTPAQ9BU02 230 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 TRIM4Q9C037 500 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 GLIPR2Q9H4G4 154 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 ZNF552Q9H707 407 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 CXorf21Q9HAI6 301 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SLC6A13Q9NSD5 602 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 SIRT3Q9NTG7 399 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.27■□□□□ 0.04
PCNX4-213ENST00000556907 PCDHGB4Q9UN71 923 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 AP3M1Q9Y2T2 418 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 PCDHB14Q9Y5E9 798 aa15.27■□□□□ 0.04
PCNX4-213ENST00000556907 DOCK10Q96BY6 2186 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 A6NL46 340 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 OR6C76A6NM76 312 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ANKRD65E5RJM6 399 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 NME4O00746 187 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 DNAJA2O60884 412 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 DNAJB5O75953 348 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ZFAND5O76080 213 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 CPSF4O95639 269 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 DDAH2O95865 285 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 NT5EP21589 574 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PPIBP23284 216 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PGDP52209 483 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 DUSP2Q05923 314 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 RUNDC3AQ59EK9 446 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PIGGQ5H8A4 983 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 SAMD4BQ5PRF9 694 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 NANOGP8Q6NSW7 305 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PGM2L1Q6PCE3 622 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ISLR2Q6UXK2 745 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 TMEM64Q6YI46 380 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 HSDL2Q6YN16 418 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ARMC10Q8N2F6 343 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 TRIML2Q8N7C3 387 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 OR5L2Q8NGL0 311 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 SLC2A12Q8TD20 617 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 SFXN5Q8TD22 340 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 BRIX1Q8TDN6 353 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PSMF1Q92530 271 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 NCLNQ969V3 563 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ABHD17AQ96GS6 310 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 DEFB126Q9BYW3 111 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 OR8D2Q9GZM6 311 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 NANOGQ9H9S0 305 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ERVK-11Q9UQG0 969 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 CFL2Q9Y281 166 aa15.26■□□□□ 0.03
PCNX4-213ENST00000556907 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.26■□□□□ 0.03
PCNX4-213ENST00000556907 ITPR1Q14643 2758 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ATXN7O15265 892 aaPredicted RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 IGKV3-11P04433 115 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 FAM87AP0C7U9 286 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ITGAMP11215 1152 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 NCBP2P52298 156 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 MANFP55145 182 aaKnown RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 EEFSECP57772 596 aaKnown RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 FUT7Q11130 342 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 HSPB3Q12988 150 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ZNF267Q14586 743 aaPredicted RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 MEP1AQ16819 746 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 PRICKLE4Q2TBC4 344 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 FAM180BQ6P0A1 224 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 IGFL2Q6UWQ7 119 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ZNF551Q7Z340 670 aaPredicted RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 CCDC116Q8IYX3 515 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 C9orf43Q8TAL5 461 aaPredicted RBP15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ZNF721Q8TF20 911 aa15.25■□□□□ 0.03
PCNX4-213ENST00000556907 ZFP90Q8TF47 636 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms