RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 MICAQ29983 383 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 TCHHL1Q5QJ38 904 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PRAMEF7Q5VXH5 474 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 OLFML2AQ68BL7 652 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 STOX1Q6ZVD7 989 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 CATSPER4Q7RTX7 472 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PRSS48Q7RTY5 328 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PSMA8Q8TAA3 256 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 SPATA13Q96N96 652 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 FAM173AQ9BQD7 235 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PAXXQ9BUH6 204 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 XPO4Q9C0E2 1151 aaKnown RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 NINJ2Q9NZG7 142 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 RAI14Q9P0K7 980 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 VPS54Q9P1Q0 977 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 IL19Q9UHD0 177 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 KLHDC2Q9Y2U9 406 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 KLF18A0A0U1RQI7 1052 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 KRT87PA6NCN2 255 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 CCT8L1PA6NM43 557 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 TLR4O00206 839 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 ARPC1BO15143 372 aaKnown RBP3.3□□□□□ -1.88
SCFD1-221ENST00000556534 PRPSAP2O60256 369 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 ATP6V1G1O75348 118 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 NUDT14O95848 222 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 WNT2P09544 360 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 IGFBP5P24593 272 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 MAPK3P27361 379 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-221ENST00000556534 SAA4P35542 130 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 FNTAP49354 379 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 SLC7A2P52569 658 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 VCPP55072 806 aaKnown RBP3.3□□□□□ -1.88
SCFD1-221ENST00000556534 HAND2P61296 217 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 SLC10A1Q14973 349 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 CD226Q15762 336 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 MS4A13Q5J8X5 152 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 MFSD7Q6UXD7 560 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 C1orf186Q6ZWK4 172 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 CNPY4Q8N129 248 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF525Q8N782 197 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 BADQ92934 168 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 DTD2Q96FN9 168 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 YTHDF1Q9BYJ9 559 aaKnown RBP3.3□□□□□ -1.88
SCFD1-221ENST00000556534 TRIM9Q9C026 710 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 TRPV6Q9H1D0 765 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 TIGARQ9NQ88 270 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 CENPMQ9NSP4 180 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 STARD5Q9NSY2 213 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 COMMD8Q9NX08 183 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 IMPAD1Q9NX62 359 aa3.3□□□□□ -1.88
SCFD1-221ENST00000556534 RPH3AQ9Y2J0 694 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-221ENST00000556534 SLC9B1P1A6NJY1 282 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 GJB5O95377 273 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 PRAMEF12O95522 483 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 LY6G6DO95868 133 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 LAMP1P11279 417 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 GDF1P27539 372 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 MAGEA9P43362 315 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CCL11P51671 97 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CNN1P51911 297 aaKnown RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 SLC25A1P53007 311 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CCZ1BP86790 482 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CCZ1P86791 482 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 TSTA3Q13630 321 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 PDK1Q15118 436 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 SHROOM1Q2M3G4 852 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 RSBN1Q5VWQ0 802 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 HIST2H2AA3Q6FI13 130 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 ATRAIDQ6UW56 229 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 TEX9Q8N6V9 391 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 NEK11Q8NG66 645 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CCT8L2Q96SF2 557 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 CARD9Q9H257 536 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 HSD3B7Q9H2F3 369 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 IKZF5Q9H5V7 419 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF275Q9NSD4 429 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 ERVK-18Q9QC07 812 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 PRODH2Q9UF12 536 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 TRMT6Q9UJA5 497 aaKnown RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 SLC9A8Q9Y2E8 581 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 MTF2Q9Y483 593 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-221ENST00000556534 RNF115Q9Y4L5 304 aa3.29□□□□□ -1.88
SCFD1-221ENST00000556534 ATRXP46100 2492 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 SYCE3A1L190 88 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 CCDC69A6NI79 296 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 STAM2O75886 525 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 PDE5AO76074 875 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 ABHD2P08910 425 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 PVRP15151 417 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 PGAM2P15259 253 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 CALRP27797 417 aaKnown RBP3.28□□□□□ -1.88
SCFD1-221ENST00000556534 RABIFP47224 123 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 NPY2RP49146 381 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 NLRP11P59045 1033 aaKnown RBP3.28□□□□□ -1.88
SCFD1-221ENST00000556534 LYZP61626 148 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 GALK2Q01415 458 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 CLPPQ16740 277 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-221ENST00000556534 GSG1Q2KHT4 349 aa3.28□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF528Q3MIS6 628 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms