RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 THOC6Q86W42 341 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 ZNF595Q8IYB9 648 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 ULK2Q8IYT8 1036 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 FBXW8Q8N3Y1 598 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 LIX1Q8N485 282 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 RNF10Q8N5U6 811 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 ZNF321PQ8N8H1 164 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 C2CD4AQ8NCU7 369 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 MORN4Q8NDC4 146 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 TNIP2Q8NFZ5 429 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 OR14A16Q8NHC5 309 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 MAIP1Q8WWC4 291 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 ATL1Q8WXF7 558 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 DAZLQ92904 295 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 FBXL8Q96CD0 374 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 ARSGQ96EG1 525 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 CAPZA3Q96KX2 299 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 JSRP1Q96MG2 331 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 RUNDC3BQ96NL0 473 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SERPINB12Q96P63 405 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 CSF3RQ99062 836 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 NPLQ9BXD5 320 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 OR8D2Q9GZM6 311 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SLC6A15Q9H2J7 730 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 COPS7BQ9H9Q2 264 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 XAB2Q9HCS7 855 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SEPSECSQ9HD40 501 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SEMA4BQ9NPR2 832 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 HOMER3Q9NSC5 361 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 TRMT1Q9NXH9 659 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 MTRF1LQ9UGC7 380 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 BOKQ9UMX3 212 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 GUCA1BQ9UMX6 200 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SLC22A14Q9Y267 594 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 CLDN16Q9Y5I7 305 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.36□□□□□ -1.55
PRKCH-220ENST00000556164 DSCAMO60469 2012 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 MED12LQ86YW9 2145 aa5.36□□□□□ -1.55
PRKCH-220ENST00000556164 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MED12Q93074 2177 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 CHD3Q12873 2000 aaKnown RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 C15orf38-AP3S2A0A0A6YYH1 394 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 FAM234BA2RU67 622 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 C17orf105B2RV13 164 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KDM4EB2RXH2 506 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 EEF1E1-BLOC1S5C9J1V9 151 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 GTPBP1O00178 669 aaKnown RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 EEF1E1O43324 174 aaKnown RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ZNF354AO60765 605 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 TSPAN9O75954 239 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 LY6G6DO95868 133 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KRT14P02533 472 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MT-ND5P03915 603 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ENO2P09104 434 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 RFPL3SP0C7P2 107 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 EPXP11678 715 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 COL6A2P12110 1019 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MLNP12872 115 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ZNF10P21506 573 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 CERS1P27544 350 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 PCSK6P29122 969 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 HNRNPH1P31943 449 aaKnown RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MSH2P43246 934 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MAGEA6P43360 314 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 TRPC1P48995 793 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 CCR9P51686 369 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 PGGT1BP53609 377 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 PLA2G16P53816 162 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 LIM2P55344 173 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ASPHQ12797 758 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 STX4Q12846 297 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 RCN2Q14257 317 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 DAZAP2Q15038 168 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 BAK1Q16611 211 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 FBXL19-AS1Q494R0 122 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ACSF3Q4G176 576 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 SHEQ5VZ18 495 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 SLC22A10Q63ZE4 541 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 TRIM40Q6P9F5 258 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KLHL17Q6TDP4 642 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 SEM1Q6ZVN7 128 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 ARMC8Q8IUR7 673 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 TMEM139Q8IV31 216 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 KLHDC8AQ8IYD2 350 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 AGGF1Q8N302 714 aaeCLIP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 MCUQ8NE86 351 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 OR5L2Q8NGL0 311 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 GABPB2Q8TAK5 448 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 NEIL3Q8TAT5 605 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 LINC01560Q8TB33 94 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 PIWIL2Q8TC59 973 aaKnown RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 SLC2A12Q8TD20 617 aa5.35□□□□□ -1.55
PRKCH-220ENST00000556164 PTPMT1Q8WUK0 201 aaPredicted RBP5.35□□□□□ -1.55
PRKCH-220ENST00000556164 FOXRED1Q96CU9 486 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms