RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TREX2Q9BQ50 279 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 BTBD2Q9BX70 525 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TPSD1Q9BZJ3 242 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 DUSP15Q9H1R2 295 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CLEC4MQ9H2X3 399 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ERVMER34-1Q9H9K5 563 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 IL21RQ9HBE5 538 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZCCHC3Q9NUD5 404 aaKnown RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 EXD2Q9NVH0 621 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 PDP1Q9P0J1 537 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 EPHA6Q9UF33 1036 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 KCND3Q9UK17 655 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 RAB23Q9ULC3 237 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 FAM32AQ9Y421 112 aaKnown RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LYVE1Q9Y5Y7 322 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 U3KQV3 271 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 SPACA6W5XKT8 324 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CDH23Q9H251 3354 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LRP4O75096 1905 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 REV3LO60673 3130 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 A0A087WV62 115 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 A0A096LPE4 126 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 A0A1W2PPZ6 126 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 BLACEA4D250 179 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GLOD5A6NK44 160 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 DUXAA6NLW8 204 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 K7ESF4 209 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TNFRSF11BO00300 401 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CYR61O00622 381 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 SH3BP5O60239 455 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GALR3O60755 368 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 MRPS14O60783 128 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ERAL1O75616 437 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 UBXN7O94888 489 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 SOX30O94993 753 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RECKO95980 971 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 STATHP02808 62 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 IFNW1P05000 195 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 BCHEP06276 602 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CCDC159P0C7I6 412 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 OR12D1P0DN82 309 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RRM2P31350 389 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TTKP33981 857 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 XKP51811 444 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 MAPK10P53779 464 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CRISP3P54108 245 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CASP9P55211 416 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 SMIM11AP58511 58 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GABARAPL2P60520 117 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RPS26P62854 115 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CSNK2BP67870 215 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TP53BP2Q13625 1128 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TCEA2Q15560 299 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 DUSP7Q16829 419 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 MICAQ29983 383 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PRTGQ2VWP7 1150 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 NADK2Q4G0N4 442 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 DEFB134Q4QY38 66 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 C6orf141Q5SZD1 244 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 FRMPD2BQ6IN97 320 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 FAM180BQ6P0A1 224 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ZCCHC12Q6PEW1 402 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 SATL1Q86VE3 508 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 MCATQ8IVS2 390 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 SFTPA2Q8IWL1 248 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GALNT12Q8IXK2 581 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 OR2L13Q8N349 312 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 LRRC25Q8N386 305 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 DNAJC22Q8N4W6 341 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 NR4A3Q92570 626 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PROX1Q92786 737 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PMM1Q92871 262 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RAB8BQ92930 207 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF566Q969W8 418 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CNDP2Q96KP4 475 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 DHRS1Q96LJ7 313 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF354BQ96LW1 612 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GUCD1Q96NT3 240 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TRNT1Q96Q11 434 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PITX2Q99697 317 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 BARD1Q99728 777 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TUBA1CQ9BQE3 449 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GABARAPL3Q9BY60 117 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ACTRT3Q9BYD9 372 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 RBM38Q9H0Z9 239 aaKnown RBP7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ING2Q9H160 280 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 OR51I1Q9H343 314 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 TBC1D17Q9HA65 648 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ACER3Q9NUN7 267 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 GIN1Q9NXP7 522 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CALML5Q9NZT1 146 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 PTGFRNQ9P2B2 879 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 THEGQ9P2T0 379 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ENOPH1Q9UHY7 261 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 ACAD8Q9UKU7 415 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 NDRG4Q9ULP0 352 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms