RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PDPK1O15530 556 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DNAJC8O75937 253 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 NEURL1O76050 574 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 UNC5CO95185 931 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 RASAL1O95294 804 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 CRYABP02511 175 aaKnown RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 RNF224P0DH78 156 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 CAPN3P20807 821 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 IL12AP29459 219 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 NTSP30990 170 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 CD96P40200 585 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 CLCN2P51788 898 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DGKQP52824 942 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 MLF1P58340 268 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 IGLV3-21P80748 117 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 MXRA7P84157 204 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SERTAD2Q14140 314 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ELOAQ14241 798 aaKnown RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 MAPKAPK3Q16644 382 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SPRED3Q2MJR0 410 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 VPS26BQ4G0F5 336 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF766Q5HY98 468 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ANKRD26P1Q6NSI1 321 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SLC48A1Q6P1K1 146 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 HORMAD2Q8N7B1 307 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 POU5F2Q8N7G0 328 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 C7orf57Q8NEG2 295 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 OR7A2PQ8NGA2 310 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 OR14A16Q8NHC5 309 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DNAJB8Q8NHS0 232 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 PRR7Q8TB68 274 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SSC4DQ8WTU2 575 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 TANKQ92844 425 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 VPS33AQ96AX1 596 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 KLHL29Q96CT2 875 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 COQ8BQ96D53 544 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SIGLEC12Q96PQ1 595 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DUSP26Q9BV47 211 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DEFB126Q9BYW3 111 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 RPF2Q9H7B2 306 aaKnown RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 PNO1Q9NRX1 252 aaKnown RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.94□□□□□ -0.981e-7■□□□□ 10.1
ACTN1-215ENST00000555616 NDE1Q9NXR1 346 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ANKRD10Q9NXR5 420 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 TAS2R7Q9NYW3 318 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 LEF1Q9UJU2 399 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 UTS2RQ9UKP6 389 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 PCDHGB4Q9UN71 923 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 EXO1Q9UQ84 846 aaKnown RBP8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ENTPD4Q9Y227 616 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF780BQ9Y6R6 833 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 POLEQ07864 2286 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 CNTRLQ7Z7A1 2325 aa8.94□□□□□ -0.98
ACTN1-215ENST00000555616 DOPEY2Q9Y3R5 2298 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 SPTBN1Q01082 2364 aaKnown RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 PRSS51A0A1B0GVH4 220 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 CFAP73A6NFT4 308 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 WIPF3A6NGB9 483 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 GLOD5A6NK44 160 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 RNASET2O00584 256 aaKnown RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 MRASO14807 208 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 AIM2O14862 343 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 FGF17O60258 216 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 NME2P1O60361 137 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 SLC25A12O75746 678 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 DDAH2O95865 285 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 LDLRP01130 860 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 LAMP1P11279 417 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 CD46P15529 392 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 NME2P22392 152 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ZFP36L2P47974 494 aaKnown RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 HLCSP50747 726 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 NCALDP61601 193 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 OC90Q02509 493 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 STX4Q12846 297 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ART3Q13508 389 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 C6orf10Q5SRN2 563 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF468Q5VIY5 522 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 C18orf63Q68DL7 685 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 SPINK14Q6IE38 97 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 OR4F3Q6IEY1 312 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF227Q86WZ6 799 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 MMP21Q8N119 569 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 TMEM178AQ8NBL3 297 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 MORN4Q8NDC4 146 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 OR4K14Q8NGD5 310 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ZFP28Q8NHY6 868 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 PTPMT1Q8WUK0 201 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 DAZLQ92904 295 aaKnown RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 NCLNQ969V3 563 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 EXOSC8Q96B26 276 aaKnown RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ANKRD9Q96BM1 317 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 RCN3Q96D15 328 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ZBED6CLQ96FA7 236 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-215ENST00000555616 ITCHQ96J02 903 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 C5orf34Q96MH7 638 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 FRMD6Q96NE9 622 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 BBS4Q96RK4 519 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 HES7Q9BYE0 225 aa8.93□□□□□ -0.98
ACTN1-215ENST00000555616 CDCP1Q9H5V8 836 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms