RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OR5D13Q8NGL4 314 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 OR4C15Q8NGM1 316 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SLC22A8Q8TCC7 542 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 RAET1EQ8TD07 263 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 RPL3LQ92901 407 aaKnown RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 SLC35C1Q96A29 364 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 NXPE2Q96DL1 559 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 KRT12Q99456 494 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 NUP58Q9BVL2 599 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 GSDMCQ9BYG8 508 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 FAM124BQ9H5Z6 455 aaPredicted RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 UTP6Q9NYH9 597 aaKnown RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 TECRQ9NZ01 308 aaKnown RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 MIOXQ9UGB7 285 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 ZDHHC2Q9UIJ5 367 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TRAF3IP3Q9Y228 551 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 KLHDC2Q9Y2U9 406 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SMAD5-AS1Q9Y6J3 95 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TRAV26-1A0A087WT03 109 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 WASHC1A8K0Z3 465 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 KIF2AO00139 706 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 SPOPO43791 374 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 JAK2O60674 1132 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 CTSVO60911 334 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 SAP30O75446 220 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 CALCAP01258 141 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 S100A9P06702 114 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 ANXA4P09525 319 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 PRSS56P0CW18 603 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 ERVK-10P10266 1014 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PNMTP11086 282 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 GP1BBP13224 206 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 LHCGRP22888 699 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PTBP1P26599 531 aaKnown RBP eCLIP4.58□□□□□ -1.683e-15■■■□□ 14.7
VRK1-203ENST00000555067 RBMS1P29558 406 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 RFC2P35250 354 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 CCR4P51679 360 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 EIF3EP60228 445 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 NAAAQ02083 359 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 FGL1Q08830 312 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 NCBP1Q09161 790 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 ITGA9Q13797 1035 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 STK11Q15831 433 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 SSX2Q16385 188 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 LRIT3Q3SXY7 679 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PRAMEF5Q5TYX0 476 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PRAMEF6Q5VXH4 476 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 CARD17Q5XLA6 110 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 OR4C11Q6IEV9 310 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 WASH2PQ6VEQ5 465 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 KDM7AQ6ZMT4 941 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 G2E3Q7L622 706 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PIWIL4Q7Z3Z4 852 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 TRMT11Q7Z4G4 463 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 GOLGA7Q7Z5G4 137 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 TRPT1Q86TN4 253 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 BIVMQ86UB2 503 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 SERINC5Q86VE9 423 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 DDHD1Q8NEL9 900 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 WDR36Q8NI36 951 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 CD99L2Q8TCZ2 262 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 PHLDA1Q8WV24 401 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 SPRYD4Q8WW59 207 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 PIK3R3Q92569 461 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 ZNF599Q96NL3 588 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 CDCA3Q99618 268 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 NLNQ9BYT8 704 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 STMN4Q9H169 189 aaPredicted RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 KAT8Q9H7Z6 458 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 ZFP14Q9HCL3 533 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 RAB18Q9NP72 206 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 ZMAT5Q9UDW3 170 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 LCMT1Q9UIC8 334 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 ZNF346Q9UL40 294 aaKnown RBP4.58□□□□□ -1.68
VRK1-203ENST00000555067 R4GN57 208 aa4.58□□□□□ -1.68
VRK1-203ENST00000555067 ARPC1BO15143 372 aaKnown RBP4.57□□□□□ -1.68
VRK1-203ENST00000555067 POLR2DO15514 142 aaKnown RBP4.57□□□□□ -1.68
VRK1-203ENST00000555067 ZSCAN12O43309 604 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 LCMT2O60294 686 aaKnown RBP4.57□□□□□ -1.68
VRK1-203ENST00000555067 RALBP11234 206 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 DARSP14868 501 aaKnown RBP4.57□□□□□ -1.68
VRK1-203ENST00000555067 GPX3P22352 226 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ACKR3P25106 362 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ALDH3B1P43353 468 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 MAGEA1P43355 309 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 MLLT10P55197 1068 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 CARD18P57730 90 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ACY1Q03154 408 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 HSPA14Q0VDF9 509 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ELAVL3Q14576 367 aaKnown RBP4.57□□□□□ -1.68
VRK1-203ENST00000555067 OR1C1Q15619 314 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 LINC01620Q4KN68 170 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 TECRLQ5HYJ1 363 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 SLC35D3Q5M8T2 416 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ATL3Q6DD88 541 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 TRPM8Q7Z2W7 1104 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ZNF554Q86TJ5 538 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 EFCAB13Q8IY85 973 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 CCDC36Q8IYA8 594 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms