RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 ZNF195O14628 629 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 SCAMP2O15127 329 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 PDPK1O15530 556 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 IFI6P09912 130 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 LAMP1P11279 417 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 CNR1P21554 472 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 HPCAL1P37235 193 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 MC3RP41968 323 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 CLDN8P56748 225 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 C21orf58P58505 322 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 DCAF7P61962 342 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 MRPL49Q13405 166 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 NTRK2Q16620 822 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 CPTPQ5TA50 214 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 SLC22A10Q63ZE4 541 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 TMEM107Q6UX40 140 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 SIAH3Q8IW03 269 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 DND1Q8IYX4 353 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 OR2L13Q8N349 312 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 ZFP62Q8NB50 900 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 ST6GALNAC3Q8NDV1 305 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 OR7A2PQ8NGA2 310 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 PAQR8Q8TEZ7 354 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 COQ8BQ96D53 544 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 LCORQ96JN0 433 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 VSTM2LQ96N03 204 aa11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 ACSS1Q9NUB1 689 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-208ENST00000554739 A0A0G2JMM0 328 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 A0A1W2PPB8 328 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 A0A1W2PRS3 328 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 ANKUB1A6NFN9 424 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 KIR3DP1A8MWS1 328 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CAPN14A8MX76 684 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 TO15178 435 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 ACOX3O15254 700 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 PSMG1O95456 288 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CT45A8P0DMV1 189 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CT45A9P0DMV2 189 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CCL3P10147 92 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 KITP10721 976 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 NAGAP17050 411 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 DDX5P17844 614 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 LBPP18428 481 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 ABCD3P28288 659 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 EPHA3P29320 983 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 MEOX1P50221 254 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 MANFP55145 182 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 NRG3P56975 720 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 FBXW4P57775 412 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 GPR85P60893 370 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 MLC1Q15049 377 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CT45A2Q5DJT8 189 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 MAVSQ7Z434 540 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 POGLUT1Q8NBL1 392 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 FAM98AQ8NCA5 519 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 OR2M7Q8NG81 312 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 OR10G3Q8NGC4 313 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 PIWIL2Q8TC59 973 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 LRRC8CQ8TDW0 803 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 HSPBAP1Q96EW2 488 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 ZBED6CLQ96FA7 236 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 C7orf26Q96N11 449 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 BTBD9Q96Q07 612 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CLMPQ9H6B4 373 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 FOLH1BQ9HBA9 442 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 PROK2Q9HC23 129 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 SACM1LQ9NTJ5 587 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 INTS9Q9NV88 658 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 TAS2R9Q9NYW1 312 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 NTMQ9P121 344 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 CHCHD2Q9Y6H1 151 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
MTHFD1-208ENST00000554739 COL12A1Q99715 3063 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 POLEQ07864 2286 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 FRG2CA6NGY1 282 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 G3V3Y1 287 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 P04436 131 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 ABCB1P08183 1280 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 PIGAP37287 484 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 RFC3P40938 356 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 CDK9P50750 372 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 CORO7P57737 925 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 ALDH6A1Q02252 535 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 HSPB3Q12988 150 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 NNATQ16517 81 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 NPSR1Q6W5P4 371 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 PRR22Q8IZ63 422 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 NATD1Q8N6N6 113 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 FAM13CQ8NE31 585 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 OR5M3Q8NGP4 307 aa11.88□□□□□ -0.51
MTHFD1-208ENST00000554739 ZFP28Q8NHY6 868 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms