RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 RNPEPL1Q9HAU8 725 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 FZD3Q9NPG1 666 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 PRMT8Q9NR22 394 aaPredicted RBP4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 FBXO6Q9NRD1 293 aaPredicted RBP4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC38A7Q9NVC3 462 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 MARCH5Q9NX47 278 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 TAS2R1Q9NYW7 299 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 NCKIPSDQ9NZQ3 722 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 STK39Q9UEW8 545 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 ADAM28Q9UKQ2 775 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 PLA2G4CQ9UP65 541 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 PRG3Q9Y2Y8 225 aaPredicted RBP4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 FAM96BQ9Y3D0 163 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 HBS1LQ9Y450 684 aaKnown RBP4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 LIPGQ9Y5X9 500 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 U3KQV3 271 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 DOCK4Q8N1I0 1966 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 LAMA5O15230 3695 aa4.9□□□□□ -1.63
MTHFD1-206ENST00000554353 HSPB2A8KAH6 182 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 I3L4J1 428 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CCDC22O60826 627 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GLRA3O75311 464 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 LYPLA1O75608 230 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ZNF189O75820 626 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CIB2O75838 187 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CLDN7O95471 211 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 PCCBP05166 539 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 FGF4P08620 206 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ERVK-10P10266 1014 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 THRBP10828 461 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 PCNAP12004 261 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ANXA8P13928 327 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ENO3P13929 434 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 HNRNPA2B1P22626 353 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CALB2P22676 271 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GCKP35557 465 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 TAGLN2P37802 199 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 NBL1P41271 181 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 BRCC3P46736 316 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 NPY2RP49146 381 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RASSF2P50749 326 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC8A3P57103 927 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 TPI1P60174 286 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RPL10AP62906 217 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SSBP2P81877 361 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ABRQ12979 859 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RNPS1Q15287 305 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RBBP5Q15291 538 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 HSPB2Q16082 182 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ETFDHQ16134 617 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 HIST2H2ACQ16777 129 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 IGSF11Q5DX21 431 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RABGAP1LQ5R372 815 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GRTP1Q5TC63 336 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ANXA8L1Q5VT79 327 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CORO6Q6QEF8 472 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GLDNQ6ZMI3 551 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ZCCHC23Q6ZST2 131 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ASCL5Q7RTU5 278 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 TAC4Q86UU9 113 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CFAP206Q8IYR0 622 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ZNF679Q8IYX0 411 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 MMP21Q8N119 569 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CCNYQ8ND76 341 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GJC3Q8NFK1 279 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CFAP61Q8NHU2 1237 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 DQX1Q8TE96 717 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 NSMCE1Q8WV22 266 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CDKL2Q92772 493 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 MYLPFQ96A32 169 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 AZIN2Q96A70 460 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 TMEM186Q96B77 213 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CERS2Q96G23 380 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 PRICKLE1Q96MT3 831 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SORT1Q99523 831 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 RBBP8Q99708 897 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CPNE1Q99829 537 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SSX3Q99909 188 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 EGFL8Q99944 293 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 WDR77Q9BQA1 342 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 EBF4Q9BQW3 602 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ACBD6Q9BR61 282 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 POLR1EQ9GZS1 481 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GBA3Q9H227 469 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 DDIT4Q9NX09 232 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SMPD3Q9NY59 655 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 TMEM216Q9P0N5 145 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 ABI3Q9P2A4 366 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 DCDC2Q9UHG0 476 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GMEB1Q9Y692 573 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 SPEGQ15772 3267 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 GREB1Q4ZG55 1949 aa4.89□□□□□ -1.63
MTHFD1-206ENST00000554353 CACNA1AO00555 2505 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms