RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 E9PI62 339 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 GFYI3L273 518 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 BRINP1O60477 761 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 ANXA9O76027 345 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR2A4O95047 310 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SLC34A2O95436 690 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 C22orf31O95567 290 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 IGHV2-5P01817 119 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 HIST1H2ABP04908 130 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SLC6A4P31645 630 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CDKN2CP42773 168 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CTSOP43234 321 aaPredicted RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 HTR5AP47898 357 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 NPBWR1P48145 328 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RFX3P48380 749 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SULT1E1P49888 294 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CRYBA2P53672 197 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SNRPGP62308 76 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 RPL38P63173 70 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 MAT1AQ00266 395 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 TPBGQ13641 420 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CDC42EP5Q6NZY7 148 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 IL27RAQ6UWB1 636 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 LRRN1Q6UXK5 716 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MOB3CQ70IA8 216 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 PDZD4Q76G19 769 aaPredicted RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 HIST3H2AQ7L7L0 130 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 PTOV1Q86YD1 416 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 GPR65Q8IYL9 337 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 POMGNT2Q8NAT1 580 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 FAM71CQ8NEG0 241 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR52B6Q8NGF0 335 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR56B4Q8NH76 319 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 THAP6Q8TBB0 222 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 STK35Q8TDR2 534 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CA5BP1Q8WTZ4 195 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SNX33Q8WV41 574 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 HIST1H2ACQ93077 130 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 KLRG1Q96E93 195 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 C1GALT1C1Q96EU7 318 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 LURAP1Q96LR2 239 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR2A7Q96R45 310 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 FCRL5Q96RD9 977 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MAPKAP1Q9BPZ7 522 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 POLDIP3Q9BY77 421 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 BEX1Q9HBH7 125 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 POPDC3Q9HBV1 291 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 DNAJC27Q9NZQ0 273 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MARCH4Q9P2E8 410 aaPredicted RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 GALPQ9UBC7 116 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 ACSL6Q9UKU0 697 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 GSTK1Q9Y2Q3 226 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CRYL1Q9Y2S2 319 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 DHRS7Q9Y394 339 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MOCS2O96007 188 aaPredicted RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 B3GALT4O96024 378 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 THP07101 528 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR8U8P0C7N1 319 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 LAG3P18627 525 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 ITGA3P26006 1051 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RBMS1P29558 406 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 CSF2RBP32927 897 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RBP2P50120 134 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CAPSQ13938 189 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 PPA1Q15181 289 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 ATAT1Q5SQI0 421 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 DOK6Q6PKX4 331 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 USP30Q70CQ3 517 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 FAM122BQ7Z309 247 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 TSPAN33Q86UF1 283 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SIAH3Q8IW03 269 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 DCUN1D3Q8IWE4 304 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CARFQ8N187 725 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 FAM46DQ8NEK8 389 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR9Q2Q8NGE9 314 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR5M3Q8NGP4 307 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RPLP0P6Q8NHW5 317 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 RNASE11Q8TAA1 199 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 CD99L2Q8TCZ2 262 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 GNPDA2Q8TDQ7 276 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 PIH1D2Q8WWB5 315 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SLC25A28Q96A46 364 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 CDK15Q96Q40 435 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 POLR1EQ9GZS1 481 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 ARL6Q9H0F7 186 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 SARS2Q9NP81 518 aaKnown RBP9.04□□□□□ -0.96
SIX4-202ENST00000554079 KLHL1Q9NR64 748 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 C2orf78A6NCI8 922 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 I6L893 689 aaPredicted RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 TCAPO15273 167 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 MSCO60682 206 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms