RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PRNPP04156 253 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 FURINP09958 794 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PCGF2P35227 344 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 TRIM23P36406 574 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SOX3P41225 446 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 RGS1Q08116 209 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 MICAQ29983 383 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 CYP27C1Q4G0S4 372 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 ANXA8L1Q5VT79 327 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 TRIQKQ629K1 86 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 KLHL17Q6TDP4 642 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 NXPE4Q6UWF7 544 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 OR8H3Q8N146 312 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 WFIKKN2Q8TEU8 576 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 GPR137Q96N19 417 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 QRFPRQ96P65 431 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 DOHHQ9BU89 302 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 MCUBQ9NWR8 336 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 DCAF16Q9NXF7 216 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SLC23A2Q9UGH3 650 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 ENOPH1Q9UHY7 261 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 HCN2Q9UL51 889 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 ING4Q9UNL4 249 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 U3KQ87 197 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PLXND1Q9Y4D7 1925 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 FAM240BA0A1B0GVZ2 78 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SMLR1H3BR10 107 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 FOXE1O00358 373 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SH3BP5O60239 455 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 HLA-DQB1P01920 261 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 CRATP43155 626 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PNLIPRP1P54315 467 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 CLDN20P56880 219 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 GPR85P60893 370 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PDE7AQ13946 482 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SPHARQ15513 63 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PTCHD4Q6ZW05 846 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 RTL10Q7L3V2 364 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 CDH24Q86UP0 819 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF680Q8NEM1 530 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 TMIEQ8NEW7 156 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 OR5AK3PQ8NH89 298 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 GOT1L1Q8NHS2 421 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-207ENST00000553837 SLC5A11Q8WWX8 675 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 AKAP1Q92667 903 aaKnown RBP eCLIP11.58□□□□□ -0.56
SHMT2-207ENST00000553837 MAPKAP1Q9BPZ7 522 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
SHMT2-207ENST00000553837 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 OR52A5Q9H2C5 316 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 TM7SF3Q9NS93 570 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
SHMT2-207ENST00000553837 A0A0B4J203 849 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ADH1CP00326 375 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 KLK1P06870 262 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ADRA2AP08913 450 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 SLC2A2P11168 524 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 OR1E2P47887 323 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 TGM4P49221 684 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 TAS2R50P59544 299 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 MXD1Q05195 221 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 C2orf80Q0P641 193 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF234Q14588 700 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ANGPTL8Q6UXH0 198 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ADGRD2Q7Z7M1 963 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 KLHL6Q8WZ60 621 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NIPSNAP1Q9BPW8 284 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 SLC35A5Q9BS91 424 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 EFCAB11Q9BUY7 163 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 BHLHE41Q9C0J9 482 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ANKRA2Q9H9E1 313 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 RLIMQ9NVW2 624 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NDUFB11Q9NX14 153 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NDUFAF4Q9P032 175 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 PLEKHB1Q9UF11 243 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NDRG2Q9UN36 371 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 LSM2Q9Y333 95 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 CLCA3PQ9Y6N3 262 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ARSBP15848 533 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 MAPK9P45984 424 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 MAN2A2P49641 1150 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 EEF1A2Q05639 463 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 DPTQ07507 201 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 HNRNPA0Q13151 305 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 RIN1Q13671 783 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 GALEQ14376 348 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF267Q14586 743 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 MEDAGQ5VYS4 303 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM65Q6PI78 240 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms