RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 GTF3C1Q12789 2109 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 STX3Q13277 289 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PDCD2Q16342 344 aaPredicted RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 NNATQ16517 81 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ZNF791Q3KP31 576 aaPredicted RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 C6orf136Q5SQH8 315 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 FHL5Q5TD97 284 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 SIAH3Q8IW03 269 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PRR22Q8IZ63 422 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 BCORP1Q8N888 145 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 TMEM178AQ8NBL3 297 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ST6GALNAC3Q8NDV1 305 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PSD4Q8NDX1 1056 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 OR7G2Q8NG99 324 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 OR52R1Q8NGF1 315 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 OR5L2Q8NGL0 311 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PPP1R14CQ8TAE6 165 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 FAM76AQ8TAV0 307 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ZNF675Q8TD23 568 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 CIDECQ96AQ7 238 aaPredicted RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 METTL2AQ96IZ6 378 aaKnown RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 SH3GL2Q99962 352 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 C1orf50Q9BV19 199 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ITPAQ9BY32 194 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 GLIPR2Q9H4G4 154 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PROK2Q9HC23 129 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 SH2D2AQ9NP31 389 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PFDN4Q9NQP4 134 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 AGPAT4Q9NRZ5 378 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 HPF1Q9NWY4 346 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 TAS2R7Q9NYW3 318 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 EHD3Q9NZN3 535 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 BCAP29Q9UHQ4 241 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 HAO1Q9UJM8 370 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 PSME2Q9UL46 239 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 ERVK-11Q9UQG0 969 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 RAP2CQ9Y3L5 183 aa7.56□□□□□ -1.2
RDH11-205ENST00000553816 NUP214P35658 2090 aaPredicted RBP7.56□□□□□ -1.2
RDH11-205ENST00000553816 TENM4Q6N022 2769 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OR6C76A6NM76 312 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 GNB5O14775 395 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 PEX1O43933 1283 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 SNNO75324 88 aaPredicted RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 GRK2P25098 689 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 PIGAP37287 484 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 GSTM5P46439 218 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 DNASE1L1P49184 302 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 RPL14P50914 215 aaKnown RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 SLC18A1P54219 525 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 FBXW4P57775 412 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 HSF1Q00613 529 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 PDE7AQ13946 482 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 PTGR1Q14914 329 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 INAQ16352 499 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 PRAMEF20Q5VT98 475 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 IL23RQ5VWK5 629 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OPN5Q6U736 354 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 NPSR1Q6W5P4 371 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 ZNF551Q7Z340 670 aaPredicted RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 CHERPQ8IWX8 916 aaKnown RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 LIX1Q8N485 282 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 KRTCAP2Q8N6L1 136 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 HORMAD2Q8N7B1 307 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OR2M7Q8NG81 312 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OR7G1Q8NGA0 311 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OR10G3Q8NGC4 313 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 OR5M3Q8NGP4 307 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 TMEM125Q96AQ2 219 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 TUBGCP3Q96CW5 907 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 ATP6V1G3Q96LB4 118 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 AMDHD1Q96NU7 426 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 BBS4Q96RK4 519 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 CCT7Q99832 543 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 NUF2Q9BZD4 464 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 STMN4Q9H169 189 aaPredicted RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 REEP4Q9H6H4 257 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 MIEF1Q9NQG6 463 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.55□□□□□ -1.2
RDH11-205ENST00000553816 SH3BP4Q9P0V3 963 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 ENTPD4Q9Y227 616 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 SVILO95425 2214 aa7.55□□□□□ -1.2
RDH11-205ENST00000553816 GCN1Q92616 2671 aaKnown RBP7.55□□□□□ -1.2
RDH11-205ENST00000553816 NPIPA5E9PKD4 350 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 SDHDO14521 159 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 HS6ST1O60243 411 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 UNC5CO95185 931 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 CRYABP02511 175 aaKnown RBP7.54□□□□□ -1.2
RDH11-205ENST00000553816 CT45A8P0DMV1 189 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 CT45A9P0DMV2 189 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 MPIP34949 423 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 MC3RP41968 323 aa7.54□□□□□ -1.2
RDH11-205ENST00000553816 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
RDH11-205ENST00000553816 CDK9P50750 372 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms