RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TMEM247A6NEH6 219 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 VGLL3A8MV65 326 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 MYO1GB0I1T2 1018 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 I3L1I5 382 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SGK494L7N484 410 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CLIC1O00299 241 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FBP2O00757 339 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PCDH17O14917 1159 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 P2RX6O15547 441 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FOXS1O43638 330 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TMPRSS11DO60235 418 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ERAL1O75616 437 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SCRG1O75711 98 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CYP7B1O75881 506 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 GPR75O95800 540 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 STATHP02808 62 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CYC1P08574 325 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 IFI6P09912 130 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 JMJD7P0C870 316 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 LAMP1P11279 417 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CEACAM1P13688 526 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CAPN3P20807 821 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FBLP22087 321 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TGM1P22735 817 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ME2P23368 584 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FPR2P25090 351 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CERS1P27544 350 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CSF2RBP32927 897 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 GALNSP34059 522 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FRKP42685 505 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ZFP36L2P47974 494 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 XKP51811 444 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 DGKQP52824 942 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 MAPK10P53779 464 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 EEFSECP57772 596 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 MC1RQ01726 317 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 STX4Q12846 297 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TRAP1Q12931 704 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TP53BP2Q13625 1128 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PUM1Q14671 1186 aaKnown RBP eCLIP4.7□□□□□ -1.664e-9■□□□□ 10.5
VTI1B-202ENST00000553619 KCNAB1Q14722 419 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 DEFB110Q30KQ9 67 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SPDYE7PQ495Y7 208 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TIGD2Q4W5G0 525 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CCDC157Q569K6 752 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PAGE3Q5JUK9 113 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SAMD4BQ5PRF9 694 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 LRIF1Q5T3J3 769 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 DCAF12Q5T6F0 453 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 NANOGP8Q6NSW7 305 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SLC48A1Q6P1K1 146 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ERICH5Q6P6B1 374 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SLC2A7Q6PXP3 512 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF793Q6ZN11 406 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ASRGL1Q7L266 308 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 RAB11FIP2Q7L804 512 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 DHDDSQ86SQ9 333 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TMPRSS12Q86WS5 348 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PROSER1Q86XN7 944 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 KIAA2013Q8IYS2 634 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 GALNT15Q8N3T1 639 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FBXW8Q8N3Y1 598 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 OR8J3Q8NGG0 315 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 OR4A15Q8NGL6 344 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 OR9A4Q8NGU2 314 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 OR51Q1Q8NH59 317 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 GOT1L1Q8NHS2 421 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 WDR36Q8NI36 951 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 DNAJB14Q8TBM8 379 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 EXOSC8Q96B26 276 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TBC1D20Q96BZ9 403 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 FAM120BQ96EK7 910 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 VPS50Q96JG6 964 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF578Q96N58 590 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 LRFN5Q96NI6 719 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ANKRD27Q96NW4 1050 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TAAR9Q96RI9 348 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CGREF1Q99674 301 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SPATA9Q9BWV2 254 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SORBS1Q9BX66 1292 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CADM1Q9BY67 442 aaKnown RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 AICDAQ9GZX7 198 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 MUC13Q9H3R2 512 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 NANOGQ9H9S0 305 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 IL1RL2Q9HB29 575 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SPAG4Q9NPE6 437 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 MKKSQ9NPJ1 570 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SLC52A3Q9NQ40 469 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 LHX9Q9NQ69 397 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PRTFDC1Q9NRG1 225 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 STARD5Q9NSY2 213 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 C14orf105Q9NVL8 296 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SLC39A1Q9NY26 324 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CES1P1Q9UKY3 287 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 ATG4BQ9Y4P1 393 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 PCDHGB3Q9Y5G1 929 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SPTBP11277 2137 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms