RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 LIX1LQ8IVB5 337 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 TAGAPQ8N103 731 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 NUDT8Q8WV74 236 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 GFM2Q969S9 779 aaKnown RBP16.69■□□□□ 0.26
SHMT2-206ENST00000553529 TP53INP1Q96A56 240 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 TP63Q9H3D4 680 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-206ENST00000553529 FLRT3Q9NZU0 649 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 ITPR2Q14571 2701 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 AQP7O14520 342 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 JUNP05412 331 aaKnown RBP16.68■□□□□ 0.26
SHMT2-206ENST00000553529 GLI4P10075 376 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 TCEA1P23193 301 aaKnown RBP16.68■□□□□ 0.26
SHMT2-206ENST00000553529 GDF1P27539 372 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 CASP3P42574 277 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 TRA2BP62995 288 aaKnown RBP16.68■□□□□ 0.26
SHMT2-206ENST00000553529 C2orf80Q0P641 193 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 CES4AQ5XG92 561 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 EIF1ADQ8N9N8 165 aaKnown RBP16.68■□□□□ 0.26
SHMT2-206ENST00000553529 OR7G1Q8NGA0 311 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 CLHC1Q8NHS4 586 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 AGR3Q8TD06 166 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 AENQ8WTP8 325 aaKnown RBP16.68■□□□□ 0.26
SHMT2-206ENST00000553529 TMBIM1Q969X1 311 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 NTNG2Q96CW9 530 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 FAIM2Q9BWQ8 316 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 ZNF780BQ9Y6R6 833 aa16.68■□□□□ 0.26
SHMT2-206ENST00000553529 HCFC1P51610 2035 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 PHF3Q92576 2039 aaKnown RBP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 A0A0G2JNJ9 132 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 GUCY1B2O75343 617 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 PPM1BO75688 479 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 EFNA1P20827 205 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 DNAJB13P59910 316 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 PLCXD2Q0VAA5 305 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 CCDC153Q494R4 210 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 ZNF385BQ569K4 471 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 SPIN4Q56A73 249 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 CFAP157Q5JU67 520 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 WIPI1Q5MNZ9 446 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 TRABD2AQ86V40 505 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 BANPQ8N9N5 519 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 CA5BP1Q8WTZ4 195 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 APOPT1Q96IL0 206 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 ZNF597Q96LX8 424 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 FAM111AQ96PZ2 611 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 ANGPTL4Q9BY76 406 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 SLC35C2Q9NQQ7 365 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 CNIH4Q9P003 139 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 Q9UFV3 132 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 ACAD8Q9UKU7 415 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 GRID1Q9ULK0 1009 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 BOKQ9UMX3 212 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-206ENST00000553529 MAPRE3Q9UPY8 281 aa16.67■□□□□ 0.26
SHMT2-206ENST00000553529 CDH16O75309 829 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CRCPO75575 148 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 TRAPPC6AO75865 159 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 TOXO94900 526 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CT45A8P0DMV1 189 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CT45A9P0DMV2 189 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 COX6B1P14854 86 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 ACVR2AP27037 513 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 MC3RP41968 323 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CCT5P48643 541 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 TFF3Q07654 80 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 KIAA0040Q15053 153 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 IMPG1Q17R60 797 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CT45A2Q5DJT8 189 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 LIPMQ5VYY2 423 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 FAM71E1Q6IPT2 247 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 GALNT18Q6P9A2 607 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 TMEM107Q6UX40 140 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 ANGPTL8Q6UXH0 198 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 RGS9BPQ6ZS82 235 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 Q6ZSR9 355 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 YRDCQ86U90 279 aaKnown RBP16.66■□□□□ 0.26
SHMT2-206ENST00000553529 NAXEQ8NCW5 288 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 RDH11Q8TC12 318 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 MED12Q93074 2177 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 CIDECQ96AQ7 238 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-206ENST00000553529 LCORQ96JN0 433 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-206ENST00000553529 UBQLN3Q9H347 655 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 FOLH1BQ9HBA9 442 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 NMRK1Q9NWW6 199 aa16.66■□□□□ 0.26
SHMT2-206ENST00000553529 C15orf38-AP3S2A0A0A6YYH1 394 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 SERTM1A2A2V5 107 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 LINC00032P0C843 101 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 DDCP20711 480 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 AGAP20933 346 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 PTPN6P29350 595 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 OR5M10Q6IEU7 315 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 NOXRED1Q6NXP6 359 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 PAOXQ6QHF9 649 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 TRIM46Q7Z4K8 759 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms