RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 IFI6P09912 130 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 DHRS4L1P0CG22 281 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 PIGAP37287 484 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 RPL3P39023 403 aaKnown RBP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 SLC18A1P54219 525 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 ABCE1P61221 599 aaKnown RBP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 RPL38P63173 70 aaKnown RBP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 FOXO1Q12778 655 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 GALNTL6Q49A17 601 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 PACS2Q86VP3 889 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 OR52N2Q8NGI0 321 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 OR5M3Q8NGP4 307 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 SPPL2AQ8TCT8 520 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 AGR3Q8TD06 166 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 KAT2AQ92830 837 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 MTERF3Q96E29 417 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 PKNOX2Q96KN3 472 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 EGLN2Q96KS0 407 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 DOHHQ9BU89 302 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 ITPAQ9BY32 194 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 NXF5Q9H1B4 397 aaKnown RBP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 PLSCR2Q9NRY7 297 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 QPCTLQ9NXS2 382 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 B4GALT7Q9UBV7 327 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 GPR55Q9Y2T6 319 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 A0A1B0GTH9 108 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 PINLYPA6NC86 204 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM233B4DJY2 109 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 G3V3Y1 287 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 ABCB7O75027 752 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 LYPLA1O75608 230 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 PPM1BO75688 479 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 JUNP05412 331 aaKnown RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 ABCB1P08183 1280 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 SDC1P18827 310 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TACR1P25103 407 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 PTGER1P34995 402 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 SOX18P35713 384 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 KRT20P35900 424 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 DNASE1L1P49184 302 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 FBXW4P57775 412 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 DUSP8Q13202 625 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 SNTA1Q13424 505 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 XKR7Q5GH72 579 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 HHATQ5VTY9 493 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM81Q6P7N7 255 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 RPTNQ6XPR3 784 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM251Q8N6I4 163 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 NATD1Q8N6N6 113 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 PPCDCQ96CD2 204 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TMCO6Q96DC7 493 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 ZBED6CLQ96FA7 236 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 AMDHD1Q96NU7 426 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 BTBD9Q96Q07 612 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 DEFB127Q9H1M4 99 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 GLIPR2Q9H4G4 154 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 TUBA8Q9NY65 449 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 SH3BP4Q9P0V3 963 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 PLEKHB1Q9UF11 243 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 CNOT11Q9UKZ1 510 aaKnown RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 EXO1Q9UQ84 846 aaKnown RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
SHMT2-204ENST00000553324 USP9XQ93008 2570 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-204ENST00000553324 ZGRF1Q86YA3 2104 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 A0A0G2JMM0 328 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 A0A1W2PPB8 328 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 A0A1W2PRS3 328 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 OR14I1A6ND48 311 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 TTC36A6NLP5 189 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 FAM166BA8MTA8 275 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 KIR3DP1A8MWS1 328 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PDPK1O15530 556 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 SUSD5O60279 629 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 HCN1O60741 890 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PEX11AO75192 247 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PDE9AO76083 593 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 IGHG3P01860 377 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PRPS2P11908 318 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 BCKDHAP12694 445 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 SLC1A6P48664 564 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 RPL14P50914 215 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 MRPS22P82650 360 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 STX3Q13277 289 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 C3AR1Q16581 482 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 SMU1Q2TAY7 513 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PRAMEF20Q5VT98 475 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM64Q6YI46 380 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 MAMDC2Q7Z304 686 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 DOLPP1Q86YN1 238 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 SLC34A3Q8N130 599 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 FNDC5Q8NAU1 212 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 OR7G2Q8NG99 324 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 ZFP28Q8NHY6 868 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 FAM57AQ8TBR7 257 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 TUBGCP3Q96CW5 907 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 OMA1Q96E52 524 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 ELP4Q96EB1 424 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 VSTM2LQ96N03 204 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms