RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 CORO2BQ9UQ03 480 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 HELZP42694 1942 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 PRRC2CQ9Y520 2896 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 A0A1W2PPK0 400 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 A0A1W2PQF6 199 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FAM170BA6NMN3 283 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CTDSP2O14595 271 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PIP5K1CO60331 668 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 RDH16O75452 317 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MFN2O95140 757 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SNX4O95219 450 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SLC2A10O95528 541 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ADH1BP00325 375 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 IFNA16P05015 189 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MRPL3P09001 348 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PRG2P13727 222 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ANXA8P13928 327 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ITGA2P17301 1181 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MAGEA2P43356 314 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PDX1P52945 283 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 REEP5Q00765 189 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ILF3Q12906 894 aaKnown RBP eCLIP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FAAH2Q6GMR7 532 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 BORAQ6PGQ7 559 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TMEM64Q6YI46 380 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SLC16A12Q6ZSM3 486 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 KRT73Q86Y46 540 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CADM2Q8N3J6 435 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CYB561A3Q8NBI2 242 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MUL1Q969V5 352 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 C1GALT1C1Q96EU7 318 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 WDR92Q96MX6 357 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TBC1D17Q9HA65 648 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TIMMDC1Q9NPL8 285 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 WSB2Q9NYS7 404 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CLEC1BQ9P126 229 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 P2RX2Q9UBL9 471 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PCDHGA2Q9Y5H1 932 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CSNK1G3Q9Y6M4 447 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 A0A0A6YYC8 382 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 I3L1I5 382 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MAGEB4O15481 346 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 OR10H2O60403 315 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 GYPBP06028 91 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FHP07954 510 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CCDC159P0C7I6 412 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CLEC2LP0C7M8 214 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SLC35G6P0C7Q6 338 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TTKP33981 857 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 GGT2P36268 569 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 RPL3P39023 403 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 LSSP48449 732 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FCHO2Q0JRZ9 810 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FADDQ13158 208 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 RUNX2Q13950 521 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 DOC2BQ14184 412 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 INSL4Q14641 139 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CTF1Q16619 201 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 DGUOKQ16854 277 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 NDUFAF6Q330K2 333 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 CCDC157Q569K6 752 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 RNASE12Q5GAN4 147 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 C10orf62Q5T681 223 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ATAD3BQ5T9A4 648 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 GTF2IRD2BQ6EKJ0 949 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ARMC6Q6NXE6 501 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SHISA6Q6ZSJ9 500 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PRICKLE2Q7Z3G6 844 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ZER1Q7Z7L7 766 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ASPGQ86U10 573 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 GTF2IRD2Q86UP8 949 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SVOPQ8N4V2 548 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TBC1D19Q8N5T2 526 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 POC5Q8NA72 575 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 AVL9Q8NBF6 648 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 FBXO15Q8NCQ5 510 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 OR9A4Q8NGU2 314 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 GATAD2BQ8WXI9 593 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PEX11GQ96HA9 241 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 LRR1Q96L50 414 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 OR7D2Q96RA2 312 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 MCHR1Q99705 422 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TSSK6Q9BXA6 273 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 C1QTNF2Q9BXJ5 285 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 TEX101Q9BY14 249 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 PLA2G12AQ9BZM1 189 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 POLR2J2Q9GZM3 115 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 NUAK2Q9H093 628 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 SOHLH2Q9NX45 425 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ERVK13-1Q9NX77 482 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
LIMA1-215ENST00000552823 KLF15Q9UIH9 416 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 ENPP5Q9UJA9 477 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 COLEC10Q9Y6Z7 277 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 LRRN3E7EW58 273 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 NPIPB8E9PQR5 432 aa5.26□□□□□ -1.57
LIMA1-215ENST00000552823 H0YGG7 62 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms