RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 SNIP1Q8TAD8 396 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 PNPT1Q8TCS8 783 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 MIPOL1Q8TD10 442 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SFXN5Q8TD22 340 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 HOXB13Q92826 284 aaPredicted RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 GATA6Q92908 595 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 NCLNQ969V3 563 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ADIPOR1Q96A54 375 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 TMEM125Q96AQ2 219 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 GIMAP5Q96F15 307 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 VMP1Q96GC9 406 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 C16orf58Q96GQ5 468 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 FBXL20Q96IG2 436 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 VPS50Q96JG6 964 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SLC35G5Q96KT7 338 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ART5Q96L15 291 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 IMMP1LQ96LU5 166 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 IP6K3Q96PC2 410 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 MS4A4EQ96PG1 132 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CDRT15Q96T59 188 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CPPED1Q9BRF8 314 aaPredicted RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 YIPF4Q9BSR8 244 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 THUMPD3Q9BV44 507 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CNPPD1Q9BV87 410 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 NUDT9Q9BW91 350 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 DPH1Q9BZG8 443 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SEMA4CQ9C0C4 833 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 OR8D2Q9GZM6 311 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 OR10A5Q9H207 317 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 IKZF5Q9H5V7 419 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CCDC86Q9H6F5 360 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 KAT8Q9H7Z6 458 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SPAG4Q9NPE6 437 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 EQTNQ9NQ60 294 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ZCCHC3Q9NUD5 404 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 DDX18Q9NVP1 670 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.95□□□□□ -1.788e-6■■■□□ 14.7
ERBB3-220ENST00000552691 WDR70Q9NW82 654 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CMTM6Q9NX76 183 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 P4HTMQ9NXG6 502 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 NDE1Q9NXR1 346 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 TMEM181Q9P2C4 612 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ABCD2Q9UBJ2 740 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 DKK4Q9UBT3 224 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 PRODH2Q9UF12 536 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ZNF223Q9UK11 482 aaPredicted RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 ANGPTL2Q9UKU9 493 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 PPIEQ9UNP9 301 aaKnown RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 SSUH2Q9Y2M2 353 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 HEMK1Q9Y5R4 338 aaPredicted RBP3.95□□□□□ -1.78
ERBB3-220ENST00000552691 MGAQ8IWI9 3026 aa3.95□□□□□ -1.78
ERBB3-220ENST00000552691 CFAP47Q6ZTR5 3102 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CACNA1GO43497 2377 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 TPRP12270 2363 aaKnown RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 NSG1A0A0A6YYJ2 146 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 C2orf92A0A1B0GVN3 265 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 MED19A0JLT2 244 aaPredicted RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PRORSD1PA6NEY8 169 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ERICH4A6NGS2 130 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 DUXAA6NLW8 204 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 OR6C76A6NM76 312 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ZNF891A8MT65 544 aaPredicted RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 MASP2O00187 686 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 HMGN4O00479 90 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PEX12O00623 359 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 NME4O00746 187 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 GSC2O15499 205 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 NKX2-8O15522 239 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 KLK10O43240 276 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PRKNO60260 465 aaPredicted RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PRAMEF2O60811 474 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 TNFRSF21O75509 655 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 DNAJC8O75937 253 aaPredicted RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 SOX30O94993 753 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CELA2AP08217 269 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 NUDT7P0C024 238 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CT45A8P0DMV1 189 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CT45A9P0DMV2 189 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 OR12D1P0DN82 309 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ACP2P11117 423 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 BMP2P12643 396 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ICAM2P13598 275 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ETFAP13804 333 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 GABRA3P34903 492 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 EIF2S3P41091 472 aaKnown RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CRATP43155 626 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 MAGEA8P43361 318 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PPICP45877 212 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 MAN2A2P49641 1150 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PRIM2P49643 509 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 ANXA11P50995 505 aaKnown RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 GZMMP51124 257 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 CLCN2P51788 898 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 SLC7A2P52569 658 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 DSTNP60981 165 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 RPS26P62854 115 aaKnown RBP3.94□□□□□ -1.78
ERBB3-220ENST00000552691 RNF4P78317 190 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 PSG6Q00889 435 aa3.94□□□□□ -1.78
ERBB3-220ENST00000552691 Q0VFX4 171 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms