RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 EXD1Q8NHP7 514 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GSDMBQ8TAX9 411 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CXorf40AQ8TE69 158 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF653Q96CK0 615 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 NUS1Q96E22 293 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 FAM81BQ96LP2 452 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC114Q96M63 670 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 OLFM3Q96PB7 478 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GBP5Q96PP8 586 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 OR2M4Q96R27 311 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PAFAH2Q99487 392 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MAP3K3Q99759 626 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 TUBGCP2Q9BSJ2 902 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CNPY3Q9BT09 278 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 RIOK2Q9BVS4 552 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GSDMCQ9BYG8 508 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KRTAP4-5Q9BYR2 181 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CARD9Q9H257 536 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MAGIXQ9H6Y5 334 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PPP1R3EQ9H7J1 279 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GPN2Q9H9Y4 310 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 FAM60AQ9NP50 221 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 IL26Q9NPH9 171 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC177Q9NQR7 707 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ACSS1Q9NUB1 689 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 AIPL1Q9NZN9 384 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 IL17CQ9P0M4 197 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 C5AR2Q9P296 337 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 RCOR3Q9P2K3 495 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PADI1Q9ULC6 663 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 STAP1Q9ULZ2 295 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CDC14AQ9UNH5 594 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF835Q9Y2P0 537 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF711Q9Y462 761 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KLK4Q9Y5K2 254 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 IGLV3-12A0A075B6K2 115 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 IGHV4-28A0A0C4DH34 117 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TRBV5-4A0A0C4DH59 114 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RGSL1A5PLK6 1076 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 OR52A4PA6NMU1 304 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ANKRD66B4E2M5 251 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GPR89AB7ZAQ6 455 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 H7C0S8 307 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 M0QZ24 198 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CACNB4O00305 520 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 BTN3A3O00478 584 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SOCS6O14544 535 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HS3ST1O14792 307 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 POLR1CO15160 346 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SMAD9O15198 467 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HSPA12AO43301 675 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SPRY3O43610 288 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 VEGFDO43915 354 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZIC3O60481 467 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZG16O60844 167 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 IGSF6O95976 241 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HLA-DQB2P05538 268 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GPR89BP0CG08 455 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GZMAP12544 262 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KRT5P13647 590 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CTSEP14091 401 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 MMP9P14780 707 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF30P17039 623 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TCN2P20062 427 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ACADLP28330 430 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 PEBP1P30086 187 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 SDC4P31431 198 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HNRNPH1P31943 449 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CSTF2P33240 577 aaKnown RBP eCLIP2.2□□□□□ -2.062e-7■■□□□ 12.9
CPSF6-207ENST00000551516 ADRA1AP35348 466 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DLSTP36957 453 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 PPP1R2P41236 205 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RFX2P48378 723 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DNA2P51530 1060 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GPR143P51810 404 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NR0B1P51843 470 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 NANOS3P60323 173 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 RPL26P61254 145 aaKnown RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 CSNK2A1P68400 391 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 GBE1Q04446 702 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 WASHC5Q12768 1159 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ILF3Q12906 894 aaKnown RBP eCLIP2.2□□□□□ -2.061e-6■■■■□ 22.3
CPSF6-207ENST00000551516 ZBTB17Q13105 803 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 MAD2L1Q13257 205 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ART3Q13508 389 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KRT31Q15323 416 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TWIST1Q15672 202 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF630Q2M218 657 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ZRANB3Q5FWF4 1079 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TCP11X2Q5H9J9 407 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 C9orf152Q5JTZ5 239 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 ERMARDQ5T6L9 678 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 FHL5Q5TD97 284 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TAF3Q5VWG9 929 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 TMEM198Q66K66 360 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 HIST2H2BDQ6DRA6 164 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 DHRS7BQ6IAN0 325 aaPredicted RBP2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KLHL10Q6JEL2 608 aa2.2□□□□□ -2.06
CPSF6-207ENST00000551516 KRT80Q6KB66 452 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms