RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KLHL17Q6TDP4 642 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 C12orf43Q96C57 262 aaKnown RBP19.64■□□□□ 0.73
PRDM4-205ENST00000550376 ARSGQ96EG1 525 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 TBC1D17Q9HA65 648 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 PHF11Q9UIL8 331 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 GALR3O60755 368 aaPredicted RBP19.64■□□□□ 0.73
PRDM4-205ENST00000550376 CPMP14384 443 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 ALDH4A1P30038 563 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 KRT20P35900 424 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 HMGA2P52926 109 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 NUDT6P53370 316 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 STARD6P59095 220 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 LSAMPQ13449 338 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 IL18R1Q13478 541 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 EXOSC7Q15024 291 aaKnown RBP19.64■□□□□ 0.73
PRDM4-205ENST00000550376 ELOCQ15369 112 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 COLEC12Q5KU26 742 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 TSSK4Q6SA08 328 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 DGAT2L6Q6ZPD8 337 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 KRT73Q86Y46 540 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 SETD9Q8NE22 299 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 SFXN5Q8TD22 340 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 HRASLS5Q96KN8 279 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 NODALQ96S42 347 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 SLC38A3Q99624 504 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 SLC38A1Q9H2H9 487 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 SEMA6CQ9H3T2 930 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 NTNG1Q9Y2I2 539 aa19.64■□□□□ 0.73
PRDM4-205ENST00000550376 CYR61O00622 381 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ZSCAN9O15535 394 aaPredicted RBP19.63■□□□□ 0.73
PRDM4-205ENST00000550376 PTNP21246 168 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 MAT1AQ00266 395 aaKnown RBP19.63■□□□□ 0.73
PRDM4-205ENST00000550376 SYT16Q17RD7 645 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 C16orf62Q7Z3J2 963 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 MCATQ8IVS2 390 aaKnown RBP19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ZNF540Q8NDQ6 660 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 SLC7A13Q8TCU3 470 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ADAMTS15Q8TE58 950 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 TGM7Q96PF1 710 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 GABARAPL3Q9BY60 117 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ZNF556Q9HAH1 456 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 HCN3Q9P1Z3 774 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 AGRPO00253 132 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 AHCYL1O43865 530 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 OR10H3O60404 316 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ATE1O95260 518 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ANXA8P13928 327 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 RACK1P63244 317 aaKnown RBP19.63■□□□□ 0.73
PRDM4-205ENST00000550376 NPTX1Q15818 432 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 ZBTB46Q86UZ6 589 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 CCDC103Q8IW40 242 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 C19orf47Q8N9M1 422 aaKnown RBP19.63■□□□□ 0.73
PRDM4-205ENST00000550376 A4GNTQ9UNA3 340 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 WDFY3Q8IZQ1 3526 aa19.63■□□□□ 0.73
PRDM4-205ENST00000550376 CENPVL1A0A0U1RR11 272 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 FOXD2O60548 495 aaPredicted RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 TRMUO75648 421 aaKnown RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CT62P0C5K7 136 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 PORP16435 677 aaPredicted RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 NT5EP21589 574 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ELAVL4P26378 380 aaKnown RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 MVKQ03426 396 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ZNF770Q6IQ21 691 aaPredicted RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CCDC81Q6ZN84 652 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CA13Q8N1Q1 262 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ACTRT3Q9BYD9 372 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ROGDIQ9GZN7 287 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 FBXO34Q9NWN3 711 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 KCND3Q9UK17 655 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CHST2Q9Y4C5 530 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 FAM221BA6H8Z2 402 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 FAM20BO75063 409 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CBLP22681 906 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 EMX1Q04741 257 aaPredicted RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 DUSP5Q16690 384 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ZNF311Q5JNZ3 666 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 MFSD12Q6NUT3 480 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 ZC3H14Q6PJT7 736 aaKnown RBP19.62■□□□□ 0.73
PRDM4-205ENST00000550376 CLIP4Q8N3C7 705 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 PIK3R3Q92569 461 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 PHOX2BQ99453 314 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 IRAK4Q9NWZ3 460 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 PTTG2Q9NZH5 202 aa19.62■□□□□ 0.73
PRDM4-205ENST00000550376 SEC16AO15027 2179 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 H1F0P07305 194 aaKnown RBP19.61■□□□□ 0.73
PRDM4-205ENST00000550376 PTGES3Q15185 160 aaKnown RBP19.61■□□□□ 0.73
PRDM4-205ENST00000550376 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.61■□□□□ 0.73
PRDM4-205ENST00000550376 AHSA2Q719I0 299 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 THAP11Q96EK4 314 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 SELENONQ9NZV5 590 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 WNT16Q9UBV4 365 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 BLOC1S6Q9UL45 172 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 POFUT2Q9Y2G5 429 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 KLK4Q9Y5K2 254 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 CPNE6O95741 557 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 PROS1P07225 676 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 AVPR1BP47901 424 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 KCNAB1Q14722 419 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 DCST1Q5T197 706 aa19.61■□□□□ 0.73
PRDM4-205ENST00000550376 USP53Q70EK8 1073 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms