RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ZNF155Q12901 538 aaPredicted RBP19.65■□□□□ 0.74
VPS29-206ENST00000549578 TP53BP2Q13625 1128 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 CYLC2Q14093 348 aaPredicted RBP19.65■□□□□ 0.74
VPS29-206ENST00000549578 TCTN3Q6NUS6 607 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 H3F3CQ6NXT2 135 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 WDR53Q7Z5U6 358 aaPredicted RBP19.65■□□□□ 0.74
VPS29-206ENST00000549578 SLC5A8Q8N695 610 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 SFXN5Q8TD22 340 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 MS4A4EQ96PG1 132 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 PAIP1Q9H074 479 aaKnown RBP19.65■□□□□ 0.74
VPS29-206ENST00000549578 FOLH1BQ9HBA9 442 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 SLAMF8Q9P0V8 285 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 PRODH2Q9UF12 536 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 VPS4AQ9UN37 437 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 CACNA1GO43497 2377 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 C2orf92A0A1B0GVN3 265 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 CAPN14A8MX76 684 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 WWP2O00308 870 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 CEACAM4O75871 244 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 ITGB2P05107 769 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 UQCRC2P22695 453 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 PTPN6P29350 595 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 TRPC1P48995 793 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 NNATQ16517 81 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 RPS19BP1Q86WX3 136 aaKnown RBP19.64■□□□□ 0.73
VPS29-206ENST00000549578 FITM2Q8N6M3 262 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 OR56A1Q8NGH5 318 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 OR5L2Q8NGL0 311 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 NUBPLQ8TB37 319 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 ADIPOR1Q96A54 375 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 GIMAP5Q96F15 307 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 VSTM2LQ96N03 204 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 SLC35A5Q9BS91 424 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 CDCP1Q9H5V8 836 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 CFL2Q9Y281 166 aa19.64■□□□□ 0.73
VPS29-206ENST00000549578 HMGN2P05204 90 aaKnown RBP19.63■□□□□ 0.73
VPS29-206ENST00000549578 COX4I1P13073 169 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 ST13P50502 369 aaKnown RBP19.63■□□□□ 0.73
VPS29-206ENST00000549578 POLE2P56282 527 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 LASP1Q14847 261 aaKnown RBP19.63■□□□□ 0.73
VPS29-206ENST00000549578 HLA-DQA1Q5Y7H0 255 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 TRIML2Q8N7C3 387 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 RP9Q8TA86 221 aaKnown RBP19.63■□□□□ 0.73
VPS29-206ENST00000549578 FBXO30Q8TB52 745 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 MOAP1Q96BY2 351 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 C16orf58Q96GQ5 468 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 YIPF4Q9BSR8 244 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 ZNF552Q9H707 407 aaPredicted RBP19.63■□□□□ 0.73
VPS29-206ENST00000549578 MYOTQ9UBF9 498 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 ITPR1Q14643 2758 aa19.63■□□□□ 0.73
VPS29-206ENST00000549578 A0A096LPI6 279 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 SOX11P35716 441 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 CORO7P57737 925 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 RPS26P62854 115 aaKnown RBP19.62■□□□□ 0.73
VPS29-206ENST00000549578 MMEL1Q495T6 779 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 CRB2Q5IJ48 1285 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 ACER2Q5QJU3 275 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 AGAP7PQ5VUJ5 663 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 REP15Q6BDI9 236 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 MFSD12Q6NUT3 480 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 LINC00696Q6ZRV3 163 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 C6orf120Q7Z4R8 191 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 ZNF441Q8N8Z8 693 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 OTUB1Q96FW1 271 aaPredicted RBP19.62■□□□□ 0.73
VPS29-206ENST00000549578 AURKBQ96GD4 344 aaPredicted RBP19.62■□□□□ 0.73
VPS29-206ENST00000549578 AGAP4Q96P64 663 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 NXF5Q9H1B4 397 aaKnown RBP19.62■□□□□ 0.73
VPS29-206ENST00000549578 IL1RL2Q9HB29 575 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 GPATCH2Q9NW75 528 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 MAP10Q9P2G4 905 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 PCDHB14Q9Y5E9 798 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 ATMQ13315 3056 aa19.62■□□□□ 0.73
VPS29-206ENST00000549578 BBIP1A8MTZ0 92 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ERN1O75460 977 aaKnown RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 OR2J2O76002 312 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 KCNH1O95259 989 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ZCCHC18P0CG32 403 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 HOXB9P17482 250 aaPredicted RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 CHI3L1P36222 383 aaPredicted RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 NR0B1P51843 470 aaKnown RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 CASP9P55211 416 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 MLF1P58340 268 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 LINC00303Q3SY05 128 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 LRIF1Q5T3J3 769 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 BHLHB9Q6PI77 547 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 DHDDSQ86SQ9 333 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 MSRB3Q8IXL7 192 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 DPP10Q8N608 796 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 JADE3Q92613 823 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 RCN3Q96D15 328 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 PHF12Q96QT6 1004 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 EPS8L2Q9H6S3 715 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 SLC25A37Q9NYZ2 338 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 VAPAQ9P0L0 249 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 TEKT2Q9UIF3 430 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 EPG5Q9HCE0 2579 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 MRASO14807 208 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ZNF354AO60765 605 aaPredicted RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 ITGA10O75578 1167 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms