RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 B3GNTL1Q67FW5 361 aaPredicted RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 TCTN3Q6NUS6 607 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 RPS19BP1Q86WX3 136 aaKnown RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 SNX32Q86XE0 403 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 DPP10Q8N608 796 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 C17orf47Q8NEP4 570 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 ITPAQ9BY32 194 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 PAIP1Q9H074 479 aaKnown RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 EPS8L2Q9H6S3 715 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 FOLH1BQ9HBA9 442 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 MYOTQ9UBF9 498 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 VPS4AQ9UN37 437 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 PCDHGA9Q9Y5G4 932 aaKnown RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 NUP214P35658 2090 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 LAMA5O15230 3695 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 A0A096LPI6 279 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 RNF103-CHMP3A0A140T963 221 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 C2orf92A0A1B0GVN3 265 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 BBIP1A8MTZ0 92 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 ANGPT2O15123 496 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 ZZEF1O43149 2961 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 MAN1A2O60476 641 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 MAP3K8P41279 467 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 POLE2P56282 527 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 RAPSNQ13702 412 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 LINC00303Q3SY05 128 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 COQ5Q5HYK3 327 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 ACER2Q5QJU3 275 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 C6orf10Q5SRN2 563 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 AGAP7PQ5VUJ5 663 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 FCRLBQ6BAA4 426 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 MFSD12Q6NUT3 480 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 DNAJC14Q6Y2X3 702 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 TRIML2Q8N7C3 387 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 OR5AK3PQ8NH89 298 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 RP9Q8TA86 221 aaKnown RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 THAP3Q8WTV1 239 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 TTC9Q92623 222 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 TP53INP1Q96A56 240 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 ZNF354BQ96LW1 612 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 AGAP4Q96P64 663 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 BTBD9Q96Q07 612 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 GAL3ST4Q96RP7 486 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 LMF2Q9BU23 707 aaKnown RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 CDCP1Q9H5V8 836 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 GPATCH2Q9NW75 528 aa19.53■□□□□ 0.72
CACNB3-210ENST00000548874 GPR55Q9Y2T6 319 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-210ENST00000548874 LOC100653049A0A140TA62 436 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 ERN1O75460 977 aaKnown RBP19.52■□□□□ 0.72
CACNB3-210ENST00000548874 KRT34O76011 436 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 HMGN2P05204 90 aaKnown RBP19.52■□□□□ 0.72
CACNB3-210ENST00000548874 GSNP06396 782 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 COX4I1P13073 169 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 PPICP45877 212 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 PRKAG1P54619 331 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 DCAF7P61962 342 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 RHDQ02161 417 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 TP53BP2Q13625 1128 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 CYLC2Q14093 348 aaPredicted RBP19.52■□□□□ 0.72
CACNB3-210ENST00000548874 MEP1AQ16819 746 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 GTDC1Q4AE62 458 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 SAXO2Q658L1 398 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 ZCCHC12Q6PEW1 402 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 BHLHB9Q6PI77 547 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 ZNF621Q6ZSS3 439 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 SZRD1Q7Z422 152 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 CLEC4FQ8N1N0 589 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 DNAJB8Q8NHS0 232 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 NEURL3Q96EH8 262 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 SMAD5Q99717 465 aaKnown RBP19.52■□□□□ 0.72
CACNB3-210ENST00000548874 SLC35A5Q9BS91 424 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 LIN28AQ9H9Z2 209 aaKnown RBP19.52■□□□□ 0.72
CACNB3-210ENST00000548874 SLAMF8Q9P0V8 285 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 MAP10Q9P2G4 905 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 TEKT2Q9UIF3 430 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 CACNA1GO43497 2377 aa19.52■□□□□ 0.72
CACNB3-210ENST00000548874 LOC400499M0QZD8 3231 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 TRBV5-3A0A0A0MS03 114 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 TTC36A6NLP5 189 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 NADKO95544 446 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-210ENST00000548874 CT45A8P0DMV1 189 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 CT45A9P0DMV2 189 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 DRD5P21918 477 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 PRDX6P30041 224 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 PSG6Q00889 435 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 ZNF155Q12901 538 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-210ENST00000548874 MFAP5Q13361 173 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 CT45A2Q5DJT8 189 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 HLA-DQA1Q5Y7H0 255 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 ISLR2Q6UXK2 745 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 DLEU7Q6UYE1 221 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 NPSR1Q6W5P4 371 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 C16orf47Q6ZP98 133 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-210ENST00000548874 C6orf120Q7Z4R8 191 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 MSRB3Q8IXL7 192 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 FITM2Q8N6M3 262 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 POU5F2Q8N7G0 328 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 CDRT4Q8N9R6 151 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 ZFP90Q8TF47 636 aa19.51■□□□□ 0.71
CACNB3-210ENST00000548874 LCORQ96JN0 433 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms