RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 NR4A3Q92570 626 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC9A6Q92581 669 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 TTC9Q92623 222 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 EXOSC8Q96B26 276 aaKnown RBP9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC38A2Q96QD8 506 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 F2RL3Q96RI0 385 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 ATF6BQ99941 703 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 MARVELD1Q9BSK0 173 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 SAP130Q9H0E3 1048 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 HMX1Q9NP08 348 aaPredicted RBP9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 SPHK2Q9NRA0 654 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 ING3Q9NXR8 418 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 ADAM29Q9UKF5 820 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 GPR34Q9UPC5 381 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 ASB4Q9Y574 426 aa9.32□□□□□ -0.92
SMARCD1-205ENST00000548573 KIAA1549LQ6ZVL6 1849 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 FAM240BA0A1B0GVZ2 78 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 CHST10O43529 356 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ORC5O43913 435 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 HPGDSO60760 199 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 CPNE3O75131 537 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 POP7O75817 140 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 UBXN7O94888 489 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 EPPINO95925 133 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ERGP11308 486 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 HOXD10P28358 340 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 CAV3P56539 151 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 RAB25P57735 213 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 GNA13Q14344 377 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 P2RY14Q15391 338 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 TYW3Q6IPR3 259 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ZNF765Q7L2R6 523 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 PARS2Q7L3T8 475 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 C17orf64Q86WR6 236 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ZNF547Q8IVP9 402 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 POGLUT1Q8NBL1 392 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 TMEM145Q8NBT3 493 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 XAGE5Q8WWM1 108 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 CAMK1GQ96NX5 476 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 IL17FQ96PD4 163 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 PLA2G12AQ9BZM1 189 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 PITHD1Q9GZP4 211 aaPredicted RBP9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 IRF2BPLQ9H1B7 796 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 NT5DC2Q9H857 520 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 LHX9Q9NQ69 397 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 WASH6PQ9NQA3 447 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 C5AR2Q9P296 337 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 POLHQ9Y253 713 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 ASF1AQ9Y294 204 aa9.31□□□□□ -0.92
SMARCD1-205ENST00000548573 PLXND1Q9Y4D7 1925 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SMIM30A4D0T7 59 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 TMPRSS11DO60235 418 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC19A2O60779 497 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 PAPLNO95428 1278 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 FGBP02675 491 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 LAG3P18627 525 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 GALP22466 123 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 HTR2BP41595 481 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC1A3P43003 542 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SLC6A11P48066 632 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 KHKP50053 298 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 ANXA11P50995 505 aaKnown RBP9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 TRA2BP62995 288 aaKnown RBP9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 GPLD1P80108 840 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 TSPAN31Q12999 210 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 IL18Q14116 193 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 NFE2L1Q14494 772 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 ARHGAP19Q14CB8 494 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 POM121L1PQ3SYA9 428 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 RASSF6Q6ZTQ3 369 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 CREB3L2Q70SY1 520 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 DEFB128Q7Z7B8 93 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 DCUN1D3Q8IWE4 304 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 CADM2Q8N3J6 435 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 OR5D16Q8NGK9 328 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SUN3Q8TAQ9 357 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 SORCS1Q8WY21 1168 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 RFKQ969G6 155 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 RGMAQ96B86 450 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 MED30Q96HR3 178 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 PINK1Q9BXM7 581 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 OR52A5Q9H2C5 316 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 MTG2Q9H4K7 406 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 TRIM45Q9H8W5 580 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 B3GAT2Q9NPZ5 323 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 DIABLOQ9NR28 239 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 ASB6Q9NWX5 421 aa9.3□□□□□ -0.92
SMARCD1-205ENST00000548573 TRPC4Q9UBN4 977 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms