RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PIP5K1BO14986 540 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 LSM1O15116 133 aaKnown RBP14.62□□□□□ -0.07
DDX54-204ENST00000546898 BIRC5O15392 142 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 CDC40O60508 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX54-204ENST00000546898 PLOD3O60568 738 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 ZG16O60844 167 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 LINC00032P0C843 101 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 ABCD3P28288 659 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 NTSP30990 170 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PTGS2P35354 604 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PIGAP37287 484 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PPICP45877 212 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 EMDP50402 254 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 RPL38P63173 70 aaKnown RBP14.62□□□□□ -0.07
DDX54-204ENST00000546898 KCNJ2P63252 427 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 UGT3A2Q3SY77 523 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PRAMEF20Q5VT98 475 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 RPTNQ6XPR3 784 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 NUDCD3Q8IVD9 361 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 TMEM251Q8N6I4 163 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 OR52N2Q8NGI0 321 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PPP1R14CQ8TAE6 165 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 CCDC120Q96HB5 630 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 SH3BGRL2Q9UJC5 107 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 TINAGQ9UJW2 476 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 CNOT11Q9UKZ1 510 aaKnown RBP14.62□□□□□ -0.07
DDX54-204ENST00000546898 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.62□□□□□ -0.07
DDX54-204ENST00000546898 A0A087WV62 115 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 A0A1B0GTH9 108 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 A1L4Q6 167 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 FRG2CA6NGY1 282 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 TO15178 435 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 TBX19O60806 448 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 COQ9O75208 318 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 PPM1BO75688 479 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 SNUPNO95149 360 aaKnown RBP14.61□□□□□ -0.07
DDX54-204ENST00000546898 ZWINTO95229 277 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 IGHG3P01860 377 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 IFI6P09912 130 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 FREM3P0C091 2139 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 SDC1P18827 310 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 DRD5P21918 477 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 TACR1P25103 407 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 NCBP2P52298 156 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDX54-204ENST00000546898 XKR7Q5GH72 579 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 TMEM81Q6P7N7 255 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 FGD2Q7Z6J4 655 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 SIMC1Q8NDZ2 872 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 FAM57AQ8TBR7 257 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 SPPL2AQ8TCT8 520 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 DIO2Q92813 273 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 KAT2AQ92830 837 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 PKNOX2Q96KN3 472 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 ZNF597Q96LX8 424 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 PPP3R2Q96LZ3 170 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 BTBD9Q96Q07 612 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 ZFP64Q9NPA5 681 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 QPCTLQ9NXS2 382 aa14.61□□□□□ -0.07
DDX54-204ENST00000546898 EXO1Q9UQ84 846 aaKnown RBP14.61□□□□□ -0.07
DDX54-204ENST00000546898 PHF3Q92576 2039 aaKnown RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 UNC79Q9P2D8 2635 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 TMEM114B3SHH9 223 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 CLDN1O95832 211 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 SERPINE1P05121 402 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 DHRS4L1P0CG22 281 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 ESRRAP11474 423 aaPredicted RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 MAPK1P28482 360 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 ARRB2P32121 409 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 MAGEA5P43359 124 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 ASMTP46597 345 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 FBXW4P57775 412 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 PLCXD2Q0VAA5 305 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 NNATQ16517 81 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 GALNTL6Q49A17 601 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 RFTN2Q52LD8 501 aaPredicted RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 TMEM64Q6YI46 380 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 PRR22Q8IZ63 422 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 SLC34A3Q8N130 599 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 OR5M3Q8NGP4 307 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 AGR3Q8TD06 166 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 PHF10Q8WUB8 498 aaKnown RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 OMA1Q96E52 524 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 EGLN2Q96KS0 407 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 VSTM2LQ96N03 204 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 DOHHQ9BU89 302 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 DEFB127Q9H1M4 99 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 ZNF703Q9H7S9 590 aaPredicted RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 PROK2Q9HC23 129 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 TAS2R9Q9NYW1 312 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 B4GALT7Q9UBV7 327 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 ZDHHC2Q9UIJ5 367 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 GPR55Q9Y2T6 319 aaPredicted RBP14.6□□□□□ -0.07
DDX54-204ENST00000546898 MEMO1Q9Y316 297 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 CACNA1CQ13936 2221 aa14.6□□□□□ -0.07
DDX54-204ENST00000546898 OR14I1A6ND48 311 aa14.59□□□□□ -0.07
DDX54-204ENST00000546898 LRRC3CA6NJW4 275 aa14.59□□□□□ -0.07
DDX54-204ENST00000546898 PLOD2O00469 737 aa14.59□□□□□ -0.07
DDX54-204ENST00000546898 PDPK1O15530 556 aa14.59□□□□□ -0.07
DDX54-204ENST00000546898 TRIM3O75382 744 aaPredicted RBP14.59□□□□□ -0.07
DDX54-204ENST00000546898 ERN1O75460 977 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms