RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 MED28Q9H204 178 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 MIXL1Q9H2W2 232 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 IMP3Q9NV31 184 aaKnown RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 TEX10Q9NXF1 929 aaPredicted RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 SOX30O94993 753 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 CA3P07451 260 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 CTSAP10619 480 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 OPRD1P41143 372 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 FBXO43Q4G163 708 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 FAAP20Q6NZ36 180 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 BHLHB9Q6PI77 547 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 MND1Q9BWT6 205 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 CCDC86Q9H6F5 360 aaKnown RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 NARFLQ9H6Q4 476 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 B3GAT2Q9NPZ5 323 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 EXO1Q9UQ84 846 aaKnown RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 A0A1W2PRG6 482 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 HEPACAM2A8MVW5 462 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 GRM6O15303 877 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PLA2G10O15496 165 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 LYRM1O43325 122 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 LANCL1O43813 399 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 IFNA14P01570 189 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 RB1P06400 928 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 GNSP15586 552 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PRKACBP22694 351 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 CRYBB2P43320 205 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 GPR1P46091 355 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 FAPQ12884 760 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 C9orf50Q5SZB4 431 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 REEP3Q6NUK4 255 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 DENND6BQ8NEG7 585 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 OR6T1Q8NGN1 323 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 UPRTQ96BW1 309 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 SCRN2Q96FV2 425 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 MKRN2Q9H000 416 aaKnown RBP13.86□□□□□ -0.19
HOXC11-202ENST00000546378 SERHL2Q9H4I8 314 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 ZC4H2Q9NQZ6 224 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 GULP1Q9UBP9 304 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 SLC25A13Q9UJS0 675 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 GSTK1Q9Y2Q3 226 aa13.86□□□□□ -0.19
HOXC11-202ENST00000546378 PDPK1O15530 556 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
HOXC11-202ENST00000546378 EPCAMP16422 314 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 SSR2P43308 183 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 MAGEB1P43366 347 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 OR3A3P47888 321 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 CDH11P55287 796 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 TCTN3Q6NUS6 607 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 COMTD1Q86VU5 262 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 FAM9CQ8IZT9 166 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 DCAF4L2Q8NA75 395 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 TEX47Q8TBZ9 253 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF431Q8TF32 576 aaPredicted RBP13.85□□□□□ -0.19
HOXC11-202ENST00000546378 QRFPRQ96P65 431 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 KATNB1Q9BVA0 655 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 FAIM2Q9BWQ8 316 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 ASAH2Q9NR71 780 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 RPL36Q9Y3U8 105 aaKnown RBP13.85□□□□□ -0.19
HOXC11-202ENST00000546378 HSPE1-MOB4S4R3N1 261 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 FZD6O60353 706 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 SEMA7AO75326 666 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 KELP23276 732 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 ACVR2AP27037 513 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 PCGF2P35227 344 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 GPR33Q49SQ1 333 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 ZC3H14Q6PJT7 736 aaKnown RBP13.85□□□□□ -0.19
HOXC11-202ENST00000546378 TMEM145Q8NBT3 493 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 OR52I1Q8NGK6 324 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 CRELD1Q96HD1 420 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 TTLL2Q9BWV7 592 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 GPR174Q9BXC1 333 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
HOXC11-202ENST00000546378 SOCS6O14544 535 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ZDHHC11BP0C7U3 371 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 MMP11P24347 488 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ASMTP46597 345 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 SLC9A3P48764 834 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 NCBP2P52298 156 aaKnown RBP eCLIP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 CCNJQ5T5M9 372 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 FAM92BQ6ZTR7 304 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 CCDC28AQ8IWP9 274 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TCEAL8Q8IYN2 117 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TMEFF1Q8IYR6 380 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 SEC14L4Q9UDX3 406 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 KCNE1BA0A087WTH5 132 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ZNF860A6NHJ4 632 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 HMX3A6NHT5 357 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 FAM170BA6NMN3 283 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 FAM171A2A8MVW0 826 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 CENPBD1B2RD01 187 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 TMEM229AB2RXF0 380 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ATG13O75143 517 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ELAVL4P26378 380 aaKnown RBP13.84□□□□□ -0.19
HOXC11-202ENST00000546378 P2RX3P56373 397 aa13.84□□□□□ -0.19
HOXC11-202ENST00000546378 ASTLQ6HA08 431 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms