RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MENTQ9BUN1 341 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 MRPL46Q9H2W6 279 aaKnown RBP6.2□□□□□ -1.42
CCDC60-205ENST00000546345 DHX35Q9H5Z1 703 aaKnown RBP6.2□□□□□ -1.42
CCDC60-205ENST00000546345 EFCAB1Q9HAE3 211 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 XAB2Q9HCS7 855 aaKnown RBP6.2□□□□□ -1.42
CCDC60-205ENST00000546345 HMG20AQ9NP66 347 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 NT5MQ9NPB1 228 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 DMRT3Q9NQL9 472 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 DDX18Q9NVP1 670 aaKnown RBP6.2□□□□□ -1.42
CCDC60-205ENST00000546345 COQ3Q9NZJ6 369 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 IL17CQ9P0M4 197 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 PAK5Q9P286 719 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 TRPS1Q9UHF7 1281 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 RIMS3Q9UJD0 308 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 NPIPA1Q9UND3 350 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 ERGIC3Q9Y282 383 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 IFT52Q9Y366 437 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 TEX264Q9Y6I9 313 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 AP1M2Q9Y6Q5 423 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 SCN3AQ9NY46 2000 aa6.2□□□□□ -1.42
CCDC60-205ENST00000546345 hCG_1818297A0A087WSY0 165 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 A0A1B0GX78 115 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 A0A1W2PRX2 142 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ISPDA4D126 451 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SAC3D1A6NKF1 404 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 FAM171A2A8MVW0 826 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 APOC4-APOC2K7ER74 178 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PFDN6O15212 129 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 FOXS1O43638 330 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SULT1C4O75897 302 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 APOC2P02655 101 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SLC4A1P02730 911 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 CD63P08962 238 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PIRTP0C851 137 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ITGAMP11215 1152 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ETS2P15036 469 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 JAK1P23458 1154 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PBLDP30039 288 aaPredicted RBP6.19□□□□□ -1.42
CCDC60-205ENST00000546345 CHRNB4P30926 498 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PTGER1P34995 402 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 NAA20P61599 178 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 MPP1Q00013 466 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 MYBPC1Q00872 1141 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ITKQ08881 620 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 EPS8Q12929 822 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 OLIG2Q13516 323 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 FLOT2Q14254 428 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ICAM4Q14773 271 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ZNF846Q147U1 533 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ATP13A5Q4VNC0 1218 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ZNF766Q5HY98 468 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 C6orf10Q5SRN2 563 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 FAM182AQ5T1J6 154 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 METRNLQ641Q3 311 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ARMC6Q6NXE6 501 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 AADACL2Q6P093 401 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SPESP1Q6UW49 350 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 HACD2Q6Y1H2 254 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PRUNE1Q86TP1 453 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 AMZ2Q86W34 360 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ADGRF3Q8IZF5 1079 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC60-205ENST00000546345 METTL25Q8N6Q8 603 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SNX31Q8N9S9 440 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 FBXO36Q8NEA4 188 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PIK3C3Q8NEB9 887 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 PYDC1Q8WXC3 89 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SCMH1Q96GD3 660 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 SIGLEC12Q96PQ1 595 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 TRIB3Q96RU7 358 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ZNF347Q96SE7 839 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 MROQ9BYG7 248 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 TRIM15Q9C019 465 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 QRSL1Q9H0R6 528 aaKnown RBP6.19□□□□□ -1.42
CCDC60-205ENST00000546345 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 ZNF711Q9Y462 761 aa6.19□□□□□ -1.42
CCDC60-205ENST00000546345 MGAM2Q2M2H8 2515 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 IGHV1-45A0A0A0MS14 117 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 A0A1W2PPR1 153 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 TCRBV9S1A1TA0A576 114 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 TMEM191CA6NGB0 347 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 OR2AG2A6NM03 316 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 AP3B1O00203 1094 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 GAPDHSO14556 408 aaPredicted RBP6.18□□□□□ -1.42
CCDC60-205ENST00000546345 KCNAB3O43448 404 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 ASNA1O43681 348 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 SGTAO43765 313 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 CRLF1O75462 422 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 POP7O75817 140 aaKnown RBP6.18□□□□□ -1.42
CCDC60-205ENST00000546345 TSPAN12O95859 305 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 MT-CYBP00156 380 aaPredicted RBP6.18□□□□□ -1.42
CCDC60-205ENST00000546345 HLA-DQB2P05538 268 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 SERPINA7P05543 415 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 RBP3P10745 1247 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 COX4I1P13073 169 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 UGT2B7P16662 529 aa6.18□□□□□ -1.42
CCDC60-205ENST00000546345 TPSB2P20231 275 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms