RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ABHD11Q8NFV4 315 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 LRP5O75197 1615 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TRBV2A0A0J9YWF9 115 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TCRBV5S1A1TA0A578 114 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 MROH6A6NGR9 719 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 PRAMEF2O60811 474 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 MITFO75030 526 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 CFIP05156 583 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 SLC22A10Q63ZE4 541 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM173Q86WV6 379 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 RABIFP47224 123 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 WNT4P56705 351 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 CRYZQ08257 329 aaKnown RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 UBQLNLQ8IYU4 475 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 CHST14Q8NCH0 376 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 OR2L8Q8NGY9 312 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 FBP2O00757 339 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 PLD2O14939 933 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 SCGNO76038 276 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 PRKCAP17252 672 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 HERV-K104P61576 105 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 RPS26P62854 115 aaKnown RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 GXYLT1Q4G148 440 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM25Q86YD3 366 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 DCP2Q8IU60 420 aaKnown RBP11.9□□□□□ -0.5
COL4A6-209ENST00000545689 FRS2Q8WU20 508 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 SLC17A9Q9BYT1 436 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 C14orf119Q9NWQ9 140 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 WASF3Q9UPY6 502 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TRAV6A0A075B6T7 132 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 A0A1W2PPL8 197 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 BLACEA4D250 179 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 I3L521 148 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 CSF2P04141 144 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 GNAO1P09471 354 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 ATXN1LP0C7T5 689 aaKnown RBP11.9□□□□□ -0.51
COL4A6-209ENST00000545689 GTF2F2P13984 249 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 RORAP35398 523 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 DEFA5Q01523 94 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 CDRT4Q8N9R6 151 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 OR5L2Q8NGL0 311 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 STOML3Q8TAV4 291 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 ISL2Q96A47 359 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 SLC39A13Q96H72 371 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 SLC29A1Q99808 456 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 URM1Q9BTM9 101 aaKnown RBP11.9□□□□□ -0.51
COL4A6-209ENST00000545689 ACPTQ9BZG2 426 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 B3GNT3Q9Y2A9 372 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 PADI2Q9Y2J8 665 aa11.9□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF860A6NHJ4 632 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 PYCR1P32322 319 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 GRK5P34947 590 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 RIDAP52758 137 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 S100A10P60903 97 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 HYAL2Q12891 473 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF534Q76KX8 674 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 P4HA3Q7Z4N8 544 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 SLC15A4Q8N697 577 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 GPR26Q8NDV2 337 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 NOTOA8MTQ0 251 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 GABBR2O75899 941 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 CSF2RAP15509 400 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 AGTR1P30556 359 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 PRPS1P60891 318 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 RPL6Q02878 288 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 SLC39A11Q8N1S5 342 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ACVR1CQ8NER5 493 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 OR51A7Q8NH64 312 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 MYH7BA7E2Y1 1941 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 EIF1AYO14602 144 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 RAB3BP20337 219 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 GTDC1Q4AE62 458 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 CBLL1Q75N03 491 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF283Q8N7M2 679 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 TANKQ92844 425 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 OR1A2Q9Y585 309 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ART1P52961 327 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 NCS1P62166 190 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 CTSL3PQ5NE16 218 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 TTC9BQ8N6N2 239 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms